| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0544 |
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| Symbol | |
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| ID | 4787387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | + |
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| Start bp | 493457 |
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| End bp | 495217 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640092971 |
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| Product | acetolactate synthase-like TPP-requiring enzyme |
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| Protein accession | YP_001023549 |
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| Protein GI | 124263079 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00261466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCGG CCACCGTTGG TGTGAACAGC GCCGCTGCCG TGATCGCACG CAAGCTCAAG
GCGCTTGAGG TTGATCGCGT CTTCGGCCTG TGCGGCGGCC ACATCATGCC GATCTGGATG
CGGCTGGATG CGGAAGGCAT CCGGATCATC GATGTGCGCG ACGAGCGCGC TGCGGTCTAC
ATGGCGCACG CCTATGGCGA ACTCAGTGGC AAGCCCGGGG TGGCGCTCGT GACGGCCGGA
CCAGGCGTCA CCAACGCCAT GACAGGTATT GCCAACGCGC ATGTCTCGCG TGCTCCAGTG
ATGATCCTTT CGGGCGTTCC CCCCAGGCCG CAACTCAGCC GCGGCGCCCT GCAGGATCTC
GACCACGTTG GCATGGTCAA GGGCATCACG CGCTTTGCCC TCACCGTGCA CGAGGCAACG
CAGGTGCCAC GCGCCATGAA CCAGGCGTGG GCTATGGCCC TCGGTGACTC AGGCGGCGAG
CCTGGTCCCG TGTTCCTAGA CTTTCCCACG GACACGCTCC GCGTCGATAT TTCGCCGGCC
GAGCAGGGGG ACGAACATGC GCGCCCAATT GCGCGCGGCG AGATTCATGC CGATCCAACC
CTTGTGTCAG AGGCGGCGGA CCTGATCTTG CACGCACGGC GGCCGCTCGT GATCGGTGGC
CGAGGGGCGC GCGCGGCGAA AGCCGAACTC GAGGAGTTCC TCGCGGCCAG TGGCGCGGTG
TTTCTCGATA CCGGGGAATG CAAGGGCGTC CTGGCCGACG ACCACCCTGG ACTGGTGAAC
GCCATGCGCG CCACGGCCAT GGGCGAAGCC GACCTCGTGA TCACCCTCGG CCGCAAGCTC
GACTTCCAAC TGGCCTACGG CTCTCCCGCC GTGTTTAGTG CGGCGCGCTG GTTGCGGATC
GCCGACAACG TCGCGGAACT ACAGGACAAC CGACGCGGAG CGGTGGAGCT CCTGGCTTCG
CCACGCCTGG CGCTGCGCGC GCTGACTGCA GCCGGACGAG GACGCGCGTC ATCGGTGGAC
CGAGCTTGGC GGGATCGCCT TTGCACCGGA CATGCGGAAC GATCGGCGAA GCTCGCTAAG
GACATGGCCA CAGCCGGCGA TGGGTCGGAC GGCCGGATGC ACCCGAACCG CCTGCTCGCC
GGAGTGCAGC GCGCGATCGG TGACGACGCC GTGGTGGTTG CCGACGGCGG TGACTTCCTG
GCCTTCGCGC GGGTGGGCAT TCGCTGCGGC ACCTATCTCG ACCCAGGGCC ATTGGGCTGC
ATCGGCGTGG GAACGTCCTT CGGCATCGGC GCCGCGCTGG CCTGCCCTCA ACGCACGGTC
GCCGTGCTGA CCGGCGATGG CGCCTTCGGT TTCAACGCCA TGGAGATCGA TACTGCCGTG
CGCCACGGCG TACCGGTGCT CGTGGTGGTG GCGAACAATG GAGCTTGGCA GATCGAGGTG
CACGACCAGA CGACCACGCA TGGCAAGGTG GTTGGCACGC GGCTGCAGCA CGCCGACCAT
GCCGCGATGG CACGCGCGTT CGGCGCGCAT GGCGAGCGCG TGGAGAGTGC GGAGCAACTG
CCGCTCGCGA TTGAACGGGC GATGGCGGCG ATCAAGTCAG GACAGCCCGC GCTGTTGGAC
GTGCTGGTGA GTGGCGAGCC CATGTCGTCG GATGCGAGGT CCGGGCTCGC ATGGGTGCCG
GATCTGCAGG CAATAGCTGC CTGGGATGAC GCCGAGCGTC AGTGGCGCGC AGGAACCACG
CGAATCGGTA TCGTGAAATG A
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| Protein sequence | MSPATVGVNS AAAVIARKLK ALEVDRVFGL CGGHIMPIWM RLDAEGIRII DVRDERAAVY
MAHAYGELSG KPGVALVTAG PGVTNAMTGI ANAHVSRAPV MILSGVPPRP QLSRGALQDL
DHVGMVKGIT RFALTVHEAT QVPRAMNQAW AMALGDSGGE PGPVFLDFPT DTLRVDISPA
EQGDEHARPI ARGEIHADPT LVSEAADLIL HARRPLVIGG RGARAAKAEL EEFLAASGAV
FLDTGECKGV LADDHPGLVN AMRATAMGEA DLVITLGRKL DFQLAYGSPA VFSAARWLRI
ADNVAELQDN RRGAVELLAS PRLALRALTA AGRGRASSVD RAWRDRLCTG HAERSAKLAK
DMATAGDGSD GRMHPNRLLA GVQRAIGDDA VVVADGGDFL AFARVGIRCG TYLDPGPLGC
IGVGTSFGIG AALACPQRTV AVLTGDGAFG FNAMEIDTAV RHGVPVLVVV ANNGAWQIEV
HDQTTTHGKV VGTRLQHADH AAMARAFGAH GERVESAEQL PLAIERAMAA IKSGQPALLD
VLVSGEPMSS DARSGLAWVP DLQAIAAWDD AERQWRAGTT RIGIVK
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