| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0374 |
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| Symbol | traF |
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| ID | 4788002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | + |
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| Start bp | 323651 |
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| End bp | 324604 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640092806 |
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| Product | sex pilus assembly protein |
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| Protein accession | YP_001023384 |
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| Protein GI | 124262914 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02740] TraF-like protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCT TCACGCTTCG TTTCGTCTGG GCAGCGCTGA CTCTTGTCGT CGCCGCGCCC
GCGCTGCGTG CCCAGGATGC CGCCGGCGGC GATGACGCGC CCGGCCGCTT CATCGAGCGC
AAGGCGGAGG GGTGGTTTTG GTACAAGGAC CCGAAGGACG CCCCGAAACC TCCGGCGCCA
AAGGCCTCCG CTCCGGCGGC TGCCAGGAGC GCGCAGCCGG CGGACGCCAG CCAGGAGCCG
TTCTCGGCCA AGTGGCTGCA GCAAAACATG CCGAAGCTGC TCGAGGCTGC CATCGACAAC
CCCACCAAGG AAAACGTCGA GGCCTACCTA TACGCGCAGC GCGTTGCGAT GGACAAGTCG
CAGACCTACG CCGAGAAGGC GCGCAGCGTG GTGGCCAGCG ACCCATTCCT CGACGAGAAC
AACCGCGTCC CGCTGTCGAC CTACGCGAAG CCCTCCTTCC TGAAAGGTGT GGAGTCCGCG
AAGACCGATG CGCTCAAGCA CCTGACGACC GTTGGAGGTC TCTGGGTGTT CTTCGACTCG
AAGTGCGAGT TCTGCCGGCC GCAGATCTTC TCGGTGCAGG AGCTCGCGCG CAAGCACGGC
TTCTACACCA AGTTCATCTC CCTGGACGGC GTCGGCGTGC CGGAGCTGAA GACCTTCGAG
AAGGACAACG GCCACGCCAA GCTGCTCAAC CTGAAGCTGA CACCCACCAC CGTCCTGGTC
GTTCCGCCGA ACAACTACTA CGTGGTCTCG CAGGGAATGA TGTCCGAAAG CCAGCTCGCC
GATCGCCTTG TGCTCGCGGC TGAGTCGCAG AACCTGCTCC CCAAAGACGT CGCCTCCAAG
GTCCGCACGT ATGACCGCGG CGTCCTTTCA GCAGAGGACA CGCAGCAGGG TGCCGGATCC
AACCCCAAAG ACTGGGTGCA GTACCTCAAG GACAAGCTGC AGGGCCGCTA CTGA
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| Protein sequence | MTRFTLRFVW AALTLVVAAP ALRAQDAAGG DDAPGRFIER KAEGWFWYKD PKDAPKPPAP
KASAPAAARS AQPADASQEP FSAKWLQQNM PKLLEAAIDN PTKENVEAYL YAQRVAMDKS
QTYAEKARSV VASDPFLDEN NRVPLSTYAK PSFLKGVESA KTDALKHLTT VGGLWVFFDS
KCEFCRPQIF SVQELARKHG FYTKFISLDG VGVPELKTFE KDNGHAKLLN LKLTPTTVLV
VPPNNYYVVS QGMMSESQLA DRLVLAAESQ NLLPKDVASK VRTYDRGVLS AEDTQQGAGS
NPKDWVQYLK DKLQGRY
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