| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0373 |
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| Symbol | |
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| ID | 4788001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | + |
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| Start bp | 323080 |
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| End bp | 323640 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640092805 |
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| Product | putative pilus assembly protein, TrhF |
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| Protein accession | YP_001023383 |
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| Protein GI | 124262913 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.340521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCG TCGCAACTTT CCATCGCACC CGGGACTGGT TCGCCGCGAT CGCGGAAGAC
CGGGCCCGCA TGCGGTTCCT TCGTCTGTCC CTCATCTGGA CGGCGGTCGC TTGGCTAGTC
GTGACGGTGG CGGCGAACAC CATCTCGCAC ACCTACAAGA TCGGCCTGGA TCTCGAGGAG
GTCCGCTGCA TGCCGTGGCG CGTCTACGTG CTCCATTTCG AGCGCCCCCA AATCGCGCGT
GGCGGCTTTG TGGCGTACCG CGACTTCGAG GGCGTCATGG GTCCCAACTA CGCCGGCAAG
ATGATCGGCA AGATGGTCGC CGGTGTGCCT GGCGATCACG TCGTCGTGAA GGACGACTTC
GCTTGGGTCA ACGGCGCGCC CGTGGGCAAG CTGATCCACA ACGCCAAGCT GGGTCGCGCG
CCCGGGGCCT TCGATCGCGA CGAGATCGTT CCGGAAGGGA AAATCTTTGT TGTCGGCACC
GAACCCCGCA GCTTCGATAG CCGCTACTGG GGCTTCCTGG ATCAGCGCTC CGTCATCGGC
AGCCTGAGCC CGTTGTTCTG A
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| Protein sequence | MNAVATFHRT RDWFAAIAED RARMRFLRLS LIWTAVAWLV VTVAANTISH TYKIGLDLEE
VRCMPWRVYV LHFERPQIAR GGFVAYRDFE GVMGPNYAGK MIGKMVAGVP GDHVVVKDDF
AWVNGAPVGK LIHNAKLGRA PGAFDRDEIV PEGKIFVVGT EPRSFDSRYW GFLDQRSVIG
SLSPLF
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