| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0117 |
|---|
| Symbol | |
|---|
| ID | 4787720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 104853 |
|---|
| End bp | 105866 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640092526 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023131 |
|---|
| Protein GI | 124262661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000532023 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCA AGACCATCAT CGGACTCGAC GTCGGACGCT CTGCCGTCAA GGTCGTCGCC
TTCGCCAACG GGCTCTACTA CCGCCTGACC TTCCCTTCGC TGGTCTCGCC GGCGTTCCCG
ATCAACGACG AGGGCACGGC CGCGCGGGCC GAACTCGAAA CGGTGGAGGT GCTGGGCAAG
CGCTACTTCA CCGGTGACAC GGCCCGGCTG CAAGGCGGCG TGAACATGTC GGTCGGCCTG
TCGCACGACT GGACCAACGG GCCGGAGTAC CTGGCTCTGG TCGCGTCCAC GATGAAGCGC
CTGGCCGCGC TGGGTGTCCC CGGCCTGGAC TCGCCGTACA TCGTTCTGGG CACCCCGGCC
TCGTTGTTCG GCCGGCAGAA GGAAGCCCTC GCGCAGCGCA CCCAAGCGGT GGTCGCTGCA
GAGATGAAGG TCTTGCCCCA ACCGATGGGC GCCTACTGCA ACTTCTTCAT GGACGCTCGC
GGCGTGCCGA TCAAGGACCG CCAGAAGCGG CCGGACGGGA AGAACCGGTC CTGGGCTGTG
GTCGAGGTCG GCCACTACAC GACCGACTTC CTCCTGATGC GCGAGGGCAA CTACATCGAG
CGGGCCGCGG TCTCCTGCGA GGGCGTTCAC TTCGCCGCCG AGAACCTGGT CCGCATCCTG
GCGGCCAAGG ACATCCAGGC GACGCCGCTC ACCGCCGAAG AGGCGCTGCG CACCGGCGTG
ATCGTCGACT TCGGCGAGCG CCGCATCGAA GCCCAAGTGG CCGAAGCGGT CGACCACGTG
GTCCAGAAGA TCATGACCAT GGCCGACTCG GTGCTGTCCA ACGATGTCCG CTCGCTGGAC
GGCGTACTGC TCGCCGGCGG TGGCGCCCCG ATCCTGGCGG CCGGCCTGCA GAAGAAGTGG
CCCCACACGG TTCTGCTCGA GAACCCCCGC ATGGCCGTGG CCGACGGGTT CTGCCGCTAC
GGCGTGGGCC AGATGCTCCG CCGCGCGATG GCGGCCGAGA AGGCAACCGC CTGA
|
|---|
| Protein sequence | MLTKTIIGLD VGRSAVKVVA FANGLYYRLT FPSLVSPAFP INDEGTAARA ELETVEVLGK
RYFTGDTARL QGGVNMSVGL SHDWTNGPEY LALVASTMKR LAALGVPGLD SPYIVLGTPA
SLFGRQKEAL AQRTQAVVAA EMKVLPQPMG AYCNFFMDAR GVPIKDRQKR PDGKNRSWAV
VEVGHYTTDF LLMREGNYIE RAAVSCEGVH FAAENLVRIL AAKDIQATPL TAEEALRTGV
IVDFGERRIE AQVAEAVDHV VQKIMTMADS VLSNDVRSLD GVLLAGGGAP ILAAGLQKKW
PHTVLLENPR MAVADGFCRY GVGQMLRRAM AAEKATA
|
|---|
| |