| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0066 |
|---|
| Symbol | |
|---|
| ID | 4787669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 56370 |
|---|
| End bp | 57209 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640092475 |
|---|
| Product | ParB, partition protein |
|---|
| Protein accession | YP_001023080 |
|---|
| Protein GI | 124262610 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.002131 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTCA GCGACGATGC GCAAGCCTTG ACCGAGGAAA ACAGGGCGCT GAAGGAAGCC
GAGGGGAGGG GCAAAGCGAT TCCTCTCGAT TTCCTCGACG ACAGCCCATA TCACATCGGC
GAGCTCGAGC CGGAGCGGGT GAAAGCACTG GAGGACAACC TCAAGCACAA CCCGCAGTCA
TCTCCGGTAG TCGTCCGTCT GAAAGCGGAC GGCCGATATG AGCTACTTGC CGGGCGCCAT
CGGGTTCGCG CGCTTCGAAA CCTTGGACGC ACAGAGGTTG AAGCGGTCAT CAAAGCCGTC
GATGACCAGC AGGCGCTACG AATCGTGGTC TATGACAACC ACATTACCCC GAATCTTTCC
GACTACCAGA AGTACCTCGG TTTCGAGCGC ATCCGCCAGG AGCGTGAGTT GACAGTGACC
GAGTTAGCCG AGGAATCCGG CGTAAGTCTG CCGGTGCTGC AGAAGATCAT GTTGTTCACT
AAGCTGCCGC CGGCCGCGCA AGAGGTTATC CGAGCGAGCC ACAGGAGCTT CGGGGCGAAT
CTCTTCGCCG GACTCGCCCC TCTGGTGGAC GATTACTCAG ACCAGGTAAC GGAGGCTGTG
AAGCTGGTCG CCGCAGGTAA GCTCAAGCAG GGTGCCGCGG TGGCATGGGT GACGAAGCCG
GGCACCGAAA ACGCCCCAGA GCCCGTGTCC GTTGCAGTGA TGAGCGGGAA GCGTCGCTAC
GCCGAAATCC GCGTGAAGAA GGCCGGCCGA CTAGAAATCG ACTTTGTGCG CGCGGAGGAC
GCAAGCGGCA TAGTGAAGAA GCTCCAGGAG TTCCTGCAGC AGGCGGCGAA GGCCTCCTGA
|
|---|
| Protein sequence | MHFSDDAQAL TEENRALKEA EGRGKAIPLD FLDDSPYHIG ELEPERVKAL EDNLKHNPQS
SPVVVRLKAD GRYELLAGRH RVRALRNLGR TEVEAVIKAV DDQQALRIVV YDNHITPNLS
DYQKYLGFER IRQERELTVT ELAEESGVSL PVLQKIMLFT KLPPAAQEVI RASHRSFGAN
LFAGLAPLVD DYSDQVTEAV KLVAAGKLKQ GAAVAWVTKP GTENAPEPVS VAVMSGKRRY
AEIRVKKAGR LEIDFVRAED ASGIVKKLQE FLQQAAKAS
|
|---|
| |