| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3677 |
|---|
| Symbol | |
|---|
| ID | 4786085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3888569 |
|---|
| End bp | 3889741 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640092260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022865 |
|---|
| Protein GI | 124268861 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0288524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTG ATTCCTTTCG ACCCCTCGCA GGCCTCAGGG TGCTCGAGTT CGGCCAGATC
GTCACGGTGC CGTTCTGCGG GATGCTGCTC GCCGACCTGG GCGCCGACGT GGTGAAGGTC
GAGAACACCG ACGGCGGCGA CGGCATGCGC CAGTGGCCGC CGCTGATGCG CGCCGCGCCC
GACGCCGAGG CCTACAGCGG CAACTTCGCC TCGCTCAACC GCAACAAGCG CAGCATCGCG
GCCAACCTCA AGGATCCGGC CGACGTGGCA CGCGTGCGCG ACCTCTGCGC GGCGGCCGAC
ATCGTGCTGG AGAACTTCCG CCCGGGCGTG ATGCAGCGCC TGGGTCTGGG CTACGAAGCG
CTGCGCGAAC GTCGCCCGCA GCTGGTGTAC TGCTCGGTCA CCGGCTACGG CCAGGACGGC
CCCTATGCGA AGAAGGGCGC CTTCGACGTG ACGGTCCAGG CCATCAGCGG GCTGATGAGC
GTGACCGGCG AGAACGACAG CATCCCCGTG AAGTGCGGCG TGCCGGTGGC CGACTTCACC
GCCGGACTCT ATGCGGCCTA TTCCATCCTC GCAGCCATCA TGGAAGTGCG TCGCACCGGC
GTCGGCACGC AGATCGACTG CTCGATGCTC GGCTGCATGC TGGGCATCTC GGCGCTGCAG
ATCAGCGAGT ACTTCGGCAC CGGCCGGGCG CCGCAGCGGC TCGGCTCGGC CCACCCGCGC
AATGCGCCGT ACCAGGCCTT CGAGGGCAGC GACAAGCCCT TCGTGATCGC CGCCGGCAAC
GACAAGCTGT GGGGCGAGGT GTGCGCGGCG GTGGGTCAAC CGCAGCTCGA GGCCGACGCG
CGCTTCGTGA CGCAGACCCT GCGGGCGGCC AACCAGCGCG AGCTCGCCGC GCTGCTGCAG
CCGCACTTCG CGCGCCGCAG CGCGGCCGAC TGGCTGGCCG AGTTCGACCG GCGCGGTGTG
CCCTGCGCAC CGATCAACGA CTTCGCCGAC ATCCTGGCCG ACCCGCACGT CAAGGAGCGC
GGCTGGGTCG CCGAGCTCGA GCTGCCCAAC GGACTGAAGA CGCCGACGAT CGGCTTTCCG
GTGCACATCG CAGGCTACGA GTTCTCGGTC GACGCCCGTC CGCCGCGTCT GGGCGAGCAC
ACCGAGGCCG TCGCCCGGGA GTGGTTGCGA TGA
|
|---|
| Protein sequence | MSVDSFRPLA GLRVLEFGQI VTVPFCGMLL ADLGADVVKV ENTDGGDGMR QWPPLMRAAP
DAEAYSGNFA SLNRNKRSIA ANLKDPADVA RVRDLCAAAD IVLENFRPGV MQRLGLGYEA
LRERRPQLVY CSVTGYGQDG PYAKKGAFDV TVQAISGLMS VTGENDSIPV KCGVPVADFT
AGLYAAYSIL AAIMEVRRTG VGTQIDCSML GCMLGISALQ ISEYFGTGRA PQRLGSAHPR
NAPYQAFEGS DKPFVIAAGN DKLWGEVCAA VGQPQLEADA RFVTQTLRAA NQRELAALLQ
PHFARRSAAD WLAEFDRRGV PCAPINDFAD ILADPHVKER GWVAELELPN GLKTPTIGFP
VHIAGYEFSV DARPPRLGEH TEAVAREWLR
|
|---|
| |