| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3662 |
|---|
| Symbol | |
|---|
| ID | 4786069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3872672 |
|---|
| End bp | 3873646 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640092244 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001022850 |
|---|
| Protein GI | 124268846 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGA GCGCCTCGCC GACCGTCCCC GCCTCGTTGC CCGAGCCGCC CTGGTGGTCG
ACCACGGACG TAGCCCTGGC CGACCGCACC GACGCCTGGG AGGCCGCGCT GAGCGACAAC
TTCCGCCGCT GGCAGGTGCC GGACCGCGTG GCACCGGAGT TCAACGCGCG TCTGCGGCAC
CGCGATGTGG CCGGGCTGCG CGTGGTCGAG TGCATCTGCG ACCCCTGCGG CGGGCGCCGG
CTGCCGCGCC ATGTGAGCCA GGAAGGGGCG GCCTACATCG GCGTGCAGAT CACCCGTTCG
GGGCGCGAGT CGCTGCGTGC CGGTGACGAG CGCGTGGCCG TCGGGCCGGG CGATCTGGTC
ATCTGGACCA GCGACCAGCC GATGGAATTC ACGGTGACCG AGCGGCTGCA CAAGGTCTCG
CTGATCCTGC CGTGGGACGA CGTGAAGGAG CGGCTGCCAC GCACCGGGCG CTTCCGCGGC
ACGGTGCTCG ACAGCCGTTC GGGCATCGGC GCGGTGCTGT ACTCGCACAT CGAGTCGCTG
GCCTCGCAGC TCGAGGATCT GGAGGCGGGC GAGCTGAGCG CGGTGCGGCG CGCCACCGTC
GAGCTGCTGA CGGCGGCGAT GTCCTGCCGC CTCGAACCGG CGCCGCGCGG CCTGTCGCTG
CAGCAGCTCA AGCGGGTGCA GGACTACATC CTCGACCATC TGCAGGACGA GACGCTGACG
CCGGGCAGCA TCGCGCAGGC GCACCACATC TCGCCGCGCT ACCTGCACTT GCTGTTCGGC
AAGACCGGGC AGAGCGTGTC GGCCTACATC CGCCAGCAGC GTCTCGAGCG CTGCGGCGAG
GCGCTGAGCA ACCCGTCCTA CCGCGAACAC AGCGTGGCCG AGATCGCCTA CCAGTGGGGC
TTCACCGACC CGGCGCACTT CAGCCGCGTC TTCAAGCAGC ATTTCGGCCA TCCGCCGGGG
CATTGCCGCC GCTGA
|
|---|
| Protein sequence | MEASASPTVP ASLPEPPWWS TTDVALADRT DAWEAALSDN FRRWQVPDRV APEFNARLRH
RDVAGLRVVE CICDPCGGRR LPRHVSQEGA AYIGVQITRS GRESLRAGDE RVAVGPGDLV
IWTSDQPMEF TVTERLHKVS LILPWDDVKE RLPRTGRFRG TVLDSRSGIG AVLYSHIESL
ASQLEDLEAG ELSAVRRATV ELLTAAMSCR LEPAPRGLSL QQLKRVQDYI LDHLQDETLT
PGSIAQAHHI SPRYLHLLFG KTGQSVSAYI RQQRLERCGE ALSNPSYREH SVAEIAYQWG
FTDPAHFSRV FKQHFGHPPG HCRR
|
|---|
| |