| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3523 |
|---|
| Symbol | |
|---|
| ID | 4786226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3733484 |
|---|
| End bp | 3734443 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640092104 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001022711 |
|---|
| Protein GI | 124268707 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0468645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.767514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATG AGCGCATGAG CACGACCCCC AACGCGCCGC TGTGGCCCCA CGTGCATGCC
CTCGGCACGA TCGCGCAGAG CGGCAGTTTC ACGCTCGCTG CGCAGCGGCT CGGCCTGTCG
AAGGCAGCGG TCAGCCAGCG CATCGCCGAA CTCGAGCGTG CGGTCGGCGT GCCGCTGCTG
CAGCGTACGA CGCGCAGCGT GCGGCTCACC GAGGCCGGCA AGCAGCTGGT CGACGAGACC
GCCGCCAGCT TTGCGCAGAT CGAGCAGAGC CTGCTCGGCG TGCGCGACCT GGCCTCGCAG
CCGCAGGGCC TGGTGCGGAT GACGGCGCCG GTCGCGCTGG GGCGCCAGCA TGTCGGTCCA
CAGCTCGAGA GCTTTCTGCG CGCCTGGCCC GGCATCCGCG TCGAACTCGA CCTGTCGGAC
CGGCTGGTCA ACCTCGCGCA CGAGGGCTTC GACCTCGCGG TGCGCCACAC CAGTGCGCCG
CCCGACAGCC ACGTGGCGTG GAAGCTGTGC GCGTCGCGCA CGCTGCTGCT GGCCTCGCCG
GCCTACCTGC GGCGGCGCGG CACGCCCCGC CATCCCGACG AGTTGGCGGG GCACGATTGC
CTGCCCTATC TGCGCAGCGG GCCGGCGCTG TGGGCCTTCG AGCAGGCCGC GACCCGGGGC
CGCCGCAGCG AGCCGGAGCG GGCCCGCGTC ACCGTGACGG GCCTGCTGCG GGCCAACAAC
TCCGAGGTGC TGCGCGACGC AGTGCTGGCT GGTCTGGGGC TCGCGCTGCT GCCCGACTTC
AGCGCGGCCG CGGCGGTGAA GGCCGGTCGG CTGCGCGAGG TGCTGCCCGA CTGGCGGCCG
GTCGGCTTCT TCGGCGATGC GATCTATGCG CTGCGACCCT TCAGCGCGCA GGTGCCGCGG
GCCGTGCGCT CGCTGGTCGA GCACCTGCGT GCCGCCCTGG CGCCGGGTTT CGAGCCCTGA
|
|---|
| Protein sequence | MNNERMSTTP NAPLWPHVHA LGTIAQSGSF TLAAQRLGLS KAAVSQRIAE LERAVGVPLL
QRTTRSVRLT EAGKQLVDET AASFAQIEQS LLGVRDLASQ PQGLVRMTAP VALGRQHVGP
QLESFLRAWP GIRVELDLSD RLVNLAHEGF DLAVRHTSAP PDSHVAWKLC ASRTLLLASP
AYLRRRGTPR HPDELAGHDC LPYLRSGPAL WAFEQAATRG RRSEPERARV TVTGLLRANN
SEVLRDAVLA GLGLALLPDF SAAAAVKAGR LREVLPDWRP VGFFGDAIYA LRPFSAQVPR
AVRSLVEHLR AALAPGFEP
|
|---|
| |