Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3405 |
Symbol | pilV |
ID | 4786335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3620637 |
End bp | 3621092 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640091981 |
Product | fimbrial biogenesis protein |
Protein accession | YP_001022593 |
Protein GI | 124268589 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0430921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAAG CCTTGTCGCT CCCTTCTGCG TCAAAGAACC GTCGGCAACG CGGCAGCACG TTGCTTGAAG TGCTGGTGGC GGTGCTGATC TTCTCGTTCG GCATCCTCGG TCTGGTGGCG ATGCAGGTCC GCGCGACCCA GTATTCGGTC GACGCGGAGG ACCGCAACCG CGCAGCGTTG TTCGCTGACG ATCTCGCGGC GCAGATGCGA CTTGCACGGA CTGTTTCGCT AGGTGCCGAC GCGATTACTG CCTGGACCAA GCGAGTGCAA GGCATCGATT TGCAGACTGA TGTGCCGAAT GGTCTGGGGC TCCCGAACGC CACAGTGCTC ATAGTCCCGA ACGCCGCCAC CAACCGGGCA CAGATCACGA TCTCTTGGCG CCACCCGAGG CAACCGATAG GCGATGTCAA CCGCCTTACG ACCGAAGTTG TGCTGACCGT CGAGGAAGTG ACATGA
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Protein sequence | MNQALSLPSA SKNRRQRGST LLEVLVAVLI FSFGILGLVA MQVRATQYSV DAEDRNRAAL FADDLAAQMR LARTVSLGAD AITAWTKRVQ GIDLQTDVPN GLGLPNATVL IVPNAATNRA QITISWRHPR QPIGDVNRLT TEVVLTVEEV T
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