Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3341 |
Symbol | |
ID | 4786440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3547529 |
End bp | 3548221 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640091914 |
Product | putative lipoprotein |
Protein accession | YP_001022529 |
Protein GI | 124268525 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0362998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGAACT GCATTCGCAT TGCGCCGCCA TCGCCCCTGG GGCATGGCCT GCGCCTGATC CTCATCCTCG CGGCGGCCAT GCTGGTCGTC GGCTGCGGCA CGGTCCGCCT GCCCGGCGGC ACACCGCCGC CCGCGCCGTC GGTCGAACCC GAAGCCAGCC CAGCGCCGCT GCCGGAGCCG CCGCAAACCC GCACGCCGCG CGTCGCCAAG CGGGCCCCCG CGCCGCTCGT CGATGCCGTG CCGCGCGTGG AGCGCATCCG CCAGGGGGCA CCGAACCATC CATATGTGAT CCGCGGCGAG TCCTACGAGC CCGATGACAC CGATGTGCCG TGGTTCGAGA TCGGCGTGGC CTCCTGGTAC GGCGAGCCCT TCCACGGACG CCGCACCGCC AACGGCGAGG TCTACGACAT GCACGGCATG ACGGCGGCGC ACAAGACGAT GCCGCTGCCC AGCTACGCGG TGGTGCGCAA CCGCGTCAAC GGCCGGCAGG TGGTGGTGCG CGTGAACGAC CGCGGTCCCT TCATCGACGG CCGCGTGATC GACCTCAGCT TCGCGGCGGC CCGCAAGCTC GGCATCCGCG GCCTCGGCGA GGTCGAGGTC CGCCGCCTGA CGCACGACGA GATCCGGGCC GGCAGCTGGA AGAAGCTGCC GCAGACGATG GCGGTGGGCG AGGACCGCGC CAAGCTCGAG TAG
|
Protein sequence | MVNCIRIAPP SPLGHGLRLI LILAAAMLVV GCGTVRLPGG TPPPAPSVEP EASPAPLPEP PQTRTPRVAK RAPAPLVDAV PRVERIRQGA PNHPYVIRGE SYEPDDTDVP WFEIGVASWY GEPFHGRRTA NGEVYDMHGM TAAHKTMPLP SYAVVRNRVN GRQVVVRVND RGPFIDGRVI DLSFAAARKL GIRGLGEVEV RRLTHDEIRA GSWKKLPQTM AVGEDRAKLE
|
| |