| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3059 |
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| Symbol | |
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| ID | 4784921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3254123 |
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| End bp | 3255220 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091630 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001022247 |
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| Protein GI | 124268243 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.110993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.360599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACGTG TACGCCACCT GCCGGCGCGA AGGCAGCCTG GACAGCGCGA TCCGCGACGC
GCGGCCCAAC GACCTGGCCG GCCTGCGCCG GCTTGCGCCG CACTGGCAGG CCGTGGCCCA
CAACGGTGGG GAGTCGGCGC GGTCGGCGCG CCTCACCGCC GCGCTCGGGC TGGTGGTGCA
CCGGCTGCCC TCCACCAGCC CCGCCAACGC CAGCTGGTCT TTCGAGCGCA AGCTCGCGGC
CTGGCGGGCG GTCTTCGAAC AACACGGACT GATCCCTACC TCCTGATGGC GACCTCCCGC
AAGCCCAAGT CGCCGACGCT CGCGCCGGCC ACGATGTCCG AGTTCGATGG CGTGCGCTAC
CTGCACCTCG GCACGCCCTG GGTGCAGGGC GCGATGCGCA TCGCCAAGCC GCAGAAGATC
GAGCTCGAGT ACGTGCAGCG GATGATGGCG TGGATGCTGC TTTCGGACCG ACTGCACGGC
GCCGCGGTCG AGAAGGACCC CGATGGCGAG CCTCCGCATG CGGTGCAGCT GGGCCTGGGG
GCGGCGGCCA TCACGCGCTT CTGTCACAAG AAGCTGCGCT GGCGCACGAC CGCCGTCGAG
ATCAACCCGA GCGTGATCGG CGTGTGCCGC ATGTGGTTCA AGCTGCCGGC CGACGACGCG
CGATTGGCAG TGATCGAGGC CGACGCCGGC GCCTACGCGG CCGATGCGGC GCACGCCGGC
CAGGCCGATG CGCTGTGCGT CGATCTCTAC GACCACGATG CCGCGGCCCC GGTGCTGGAC
GACGAGGCCT TCTACCGCGG TTGCCGCGCG TTGCTGGCGG AGGGTGGGGT GATGAGCGTC
AACCTGTTCG GCCGCGACGT GAGCTTCGAT CGCAGCGCGC GGCGCATCGC CGCGGTGTTC
GGTGCCGACC GGATCCTGAT GCTCAAGCCG ACCCGCGAGG GCAACACCAT CCTGCTGGCC
TGGCGAGGCA GCGATCGGCC GGGGCGTGAA GAACTCGAAC GCCGTGCCGC GGCGATCGAG
GCAAAGTTCG ACCTGCCGGC CCGCAAATGG CTCAAGCTCT TGCAGAATCT GCCCGAACGC
CTCCCCACTG CTGCCTGA
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| Protein sequence | MGRVRHLPAR RQPGQRDPRR AAQRPGRPAP ACAALAGRGP QRWGVGAVGA PHRRARAGGA
PAALHQPRQR QLVFRAQARG LAGGLRTTRT DPYLLMATSR KPKSPTLAPA TMSEFDGVRY
LHLGTPWVQG AMRIAKPQKI ELEYVQRMMA WMLLSDRLHG AAVEKDPDGE PPHAVQLGLG
AAAITRFCHK KLRWRTTAVE INPSVIGVCR MWFKLPADDA RLAVIEADAG AYAADAAHAG
QADALCVDLY DHDAAAPVLD DEAFYRGCRA LLAEGGVMSV NLFGRDVSFD RSARRIAAVF
GADRILMLKP TREGNTILLA WRGSDRPGRE ELERRAAAIE AKFDLPARKW LKLLQNLPER
LPTAA
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