| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2983 |
|---|
| Symbol | |
|---|
| ID | 4783587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3170934 |
|---|
| End bp | 3171833 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640091554 |
|---|
| Product | putative ParB-like partioning protein |
|---|
| Protein accession | YP_001022171 |
|---|
| Protein GI | 124268167 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATT CGCTGCCCCG GGAGATTCGC CAGATTCCGC TGGATCGCAT CGACGTCTTG
AATCCCCGCG AGCGCAACGC CAAGGCGTTT GCCGACATCG TCGCCAACAT CAAGGCGATC
GGCCTGAAGA AGCCGATCGT GGTGACACCG CGACCGTCTG ACGATGGTTC CGATCGGTAT
CTTCTGGTCT GCGGCGAAGG CCGCATGAAG GCGTTCAACG CGCTCGGCCA GGCCACGATT
CCCGCCCTTG TGGTCGAGGT TGACGATGAG GATGCCTTCA TCATGAGTCT GACCGAGAAC
GTTGCTCGGC GGCAATGGAG GCCGTTGGAA CTGCTTGCAG GCATCGAGCA GTTGCTGGCG
CGCGGCTACA ACCCTCGACA GATCAGCGTC AAGACGGGCC TGACCTTCAG CTACGTGCAG
GGAATCGTCA GTCTGATCAA AGGTGGCGAG CAACGCCTGC TCGTCGCTGT CGAAAAGGGC
GACGTGCCGC TCAACGCGGC CCTCGCAATC GTCGGCGCCG GTGATGACGA CAAGGCTGTT
CAGGCTGCGC TGCAGGAAGC CTATGAGGCC GGCACACTCC GCGGACGGAA GCTGATCGAT
ACACGGCGCG TGCTTGAGCG GCGATCCAAG CTGGGCCGAT CCATCGCTCG ACGAATGCCC
CGAGGGACGA GCGACGTGAC GACGTCGAGC CTGGTACGCA CCTACCAGAA GGAGGTGGAG
CGGCAGAAGG CGATGGTTCG GAAGGCCACC ATCGCGCAGC AGCGACTACT GTTCACCGTC
AGTGCCCTGC AGGAGTTGTT CAAGGACGAC AACTTCGTCA ACTTGCTCCG TGCAGAGGGG
CTGGACACAC TGCCCAGGTA CCTCGCCGAG CGGGTCTGGA CGGACGGTCG GCGAACATGA
|
|---|
| Protein sequence | MSDSLPREIR QIPLDRIDVL NPRERNAKAF ADIVANIKAI GLKKPIVVTP RPSDDGSDRY
LLVCGEGRMK AFNALGQATI PALVVEVDDE DAFIMSLTEN VARRQWRPLE LLAGIEQLLA
RGYNPRQISV KTGLTFSYVQ GIVSLIKGGE QRLLVAVEKG DVPLNAALAI VGAGDDDKAV
QAALQEAYEA GTLRGRKLID TRRVLERRSK LGRSIARRMP RGTSDVTTSS LVRTYQKEVE
RQKAMVRKAT IAQQRLLFTV SALQELFKDD NFVNLLRAEG LDTLPRYLAE RVWTDGRRT
|
|---|
| |