| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2950 |
|---|
| Symbol | |
|---|
| ID | 4784372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3133218 |
|---|
| End bp | 3134399 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640091521 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001022138 |
|---|
| Protein GI | 124268134 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00573784 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.780018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG CCCGGCGCCT CGACCGCATC GAGCCGTTCT ACGTGATGGA GTGCGCCAAG
GCAGCGGCGC GCATCGCTGC CAGCCCGGCC TGCGATCCGG CACGCGGCGG CGAGCCGATG
ATCTACCTGA ACATCGGTGA ACCCGACTTC ACCGCGCCGG CGCCGGTGCT CGAGGCGGCG
CAGCGCTGCC TCGCCGAGGG CCGCACGCAG TACACCCCGG CCACCGGGCT GCCTGCGCTG
CGCGAGGCGC TGTCGCGCTG GTATGCGCAG CGCTTCGCGC TCGACATCGA CCCGCAGCGC
ATCGTCATCA CGGCCGGCGC GTCGGCCGCG CTGCAGCTCG CCTGCCTGGC GCTTTTCGAG
TCCGGCGACG AGGTGCTGAT GCCGGATCCG AGCTACCCCT GCAATCGCCA TTTCGTCGCG
GCGGCCGACG CCACGCCGGT GCTGCTGCCC TGTGGCCCGG TGCAGCGCTA TCAGCTCGAC
GCCGCCGGGG TGGAGCGGGC GTGGAACGCG CGCACCCGCG GCGTGCTGCT GGCGTCGCCG
TCCAACCCCA CCGGCACTTC GATCGCCGCC GACGAGATGC AGCGCATCGC ACAGGCGGTG
CGCGCACGCG GCGGCGTCAC GCTGGTCGAC GAGATCTACC TGGGCCTGAG CTACGACGCC
GCCTACGGCC GCTCCGCGCT CGCCCACGGC GACGACGTGG TGTCGATCAA CAGCTTCTCC
AAATACTTCA GCATGACCGG CTGGCGGCTG GGCTGGCTGG TGCTGCCGCC CGCGCTGGTG
GCGCCGGTCG AGAAGCTGGC GCAGAACCTG TTCATCTGCC CGTCCAGCGT CGCGCAGCAC
GCGGCGCTGG CCTGCTTCGA GCCCGCATCG ATCGCCGAGT ACGAACGCCG CCGTGCCGCC
TTCCGGGCCC GGCGCGACTA CATCGTGCCC GCGCTCGCGT CGCTCGGCCT GCCGGTGCCG
GTGCTGCCCG ACGGCGCCTT CTATGCCTGG GCCGACTGCT CGACCCACGC CGGCAGCAGC
TGGGACCTGG CGTTCGCGCT CATGGATTCG GCCCATGTCG CGCTGACGCC GGGGCGCGAT
TTCGGCCGGC ACGGCACTGA ACACCACCTG CGACTGTCCT TCGCCAGCAG CCTGCCGCAG
CTCGAACAGG CCGTCGCGCG CCTGCGGCGC GTGCTGGCAT GA
|
|---|
| Protein sequence | MKLARRLDRI EPFYVMECAK AAARIAASPA CDPARGGEPM IYLNIGEPDF TAPAPVLEAA
QRCLAEGRTQ YTPATGLPAL REALSRWYAQ RFALDIDPQR IVITAGASAA LQLACLALFE
SGDEVLMPDP SYPCNRHFVA AADATPVLLP CGPVQRYQLD AAGVERAWNA RTRGVLLASP
SNPTGTSIAA DEMQRIAQAV RARGGVTLVD EIYLGLSYDA AYGRSALAHG DDVVSINSFS
KYFSMTGWRL GWLVLPPALV APVEKLAQNL FICPSSVAQH AALACFEPAS IAEYERRRAA
FRARRDYIVP ALASLGLPVP VLPDGAFYAW ADCSTHAGSS WDLAFALMDS AHVALTPGRD
FGRHGTEHHL RLSFASSLPQ LEQAVARLRR VLA
|
|---|
| |