| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2860 |
|---|
| Symbol | |
|---|
| ID | 4785554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3047913 |
|---|
| End bp | 3048509 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640091431 |
|---|
| Product | response regulator |
|---|
| Protein accession | YP_001022049 |
|---|
| Protein GI | 124268045 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCAGCA AGGGCAAGAT CCTCGTCGTC GATGACGACA GGCTGGTGCT GGCGACGCTG
ACGCACGGCT TGTCCGCGGC CGGCTATGCC GTGGTCGACG CCGACAATGG CGACGACGCC
ATCCTCGAGG CGCGCACGCG CCGGCCGGAC CTGGCCCTGC TCGACATCCG CATGGAGGGC
AAGAGCGGAT TCGACGTGGC CGCCTACCTG CGAGAGCACG GCAGCGTGCC CTTCATGTTC
CTGTCGGCCT TCTCCGACGC GGCCACGGTG GCGCAGGTGC GGGCCCTGGG CGCACTGGAT
CACCTGATCA AGCCGGTCGA CATGCGGCAG ATCCTGCCGG CGGTCGAGGC GGCGTTCAAG
CGCATCCGCG GCGGGGTCGA ACCGGTCGCC GAGGTCGGTG CGCCGCGTCC GCGCGATCCG
CTGTCCGATC CGGTGGCCAT CGCGGTCGGC GTGGTGATGC ACAGGCACTC GCTGCCGCGT
GCCGTGGCGC TGGAGCGGCT GCGCCGGCTG GCGACGCATC ACGGGCGGGC GCTGGAGGCC
GAGTGCGAGC AGCTCCTGGC CGCGGTCGAG CTGTTGTCGG CGCCTGCGGC GCCGTGA
|
|---|
| Protein sequence | MSSKGKILVV DDDRLVLATL THGLSAAGYA VVDADNGDDA ILEARTRRPD LALLDIRMEG
KSGFDVAAYL REHGSVPFMF LSAFSDAATV AQVRALGALD HLIKPVDMRQ ILPAVEAAFK
RIRGGVEPVA EVGAPRPRDP LSDPVAIAVG VVMHRHSLPR AVALERLRRL ATHHGRALEA
ECEQLLAAVE LLSAPAAP
|
|---|
| |