Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2519 |
Symbol | |
ID | 4785065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 2688766 |
End bp | 2689443 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640091089 |
Product | cell wall-associated hydrolase-like protein |
Protein accession | YP_001021709 |
Protein GI | 124267705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAC TGCCCCGGAG CCTGCGGCCG CCATTGGCCA GCCTGTGCTT GGCCTTGTGC CTGGCCGGCA CGAACGTGCA GGCCGAGCCG GGTGCCACCG ACAGCGCGCC GGACAGCGTG GCCCGCTTCC TCGCCGAGCG CGGCCTGATC GAACCGATCC CGGCCGATTC CTCGTTCGCC CAGCAGGTGC GCGAGCGCGC CGCCGACTGG ACCTCGGACC TCGTACTGTC GGCCATGAAC TTCCTGGGCG TGCGCTACCG CCGCGGCGGC GAGACCGCCG AGCAGGGCTT CGACTGCAGC GGTTTCACGC GCCACGTGTT CGAGGCCAGC GTCGGACTGG TGCTGCCGCG CCGCTCGAAC GAGCAGGCCA AGGCGCCGGG CCTGCTGAAC GTCAACCGCG ACGAGCTCAA GCCTGGCGAC CTGGTGTTCT TCAACACCCT GCGCACGGCG TTCTCGCATG TCGGCATCTA CGTCGGCGAC GGCAAGTTCA TCCACGCCCC CCGCACCGGC GGCAAGGTGC GTGTGGAGGA CATGCGTGTC GCCTACTGGA GCAAGCGCTA CGACGGTGCA CGGCGTGCGC CGCAGCCGGC CGAAACGGCG GTCACGGCGA GCCCGGCATC GACACCCGCG GTGGCCGCGA CCGCCCTCGC CTCGCCACTC GCCAGCCCCG GTCATTGA
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Protein sequence | MIRLPRSLRP PLASLCLALC LAGTNVQAEP GATDSAPDSV ARFLAERGLI EPIPADSSFA QQVRERAADW TSDLVLSAMN FLGVRYRRGG ETAEQGFDCS GFTRHVFEAS VGLVLPRRSN EQAKAPGLLN VNRDELKPGD LVFFNTLRTA FSHVGIYVGD GKFIHAPRTG GKVRVEDMRV AYWSKRYDGA RRAPQPAETA VTASPASTPA VAATALASPL ASPGH
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