Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2518 |
Symbol | |
ID | 4785064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2687941 |
End bp | 2688606 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640091088 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001021708 |
Protein GI | 124267704 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.382378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCT CTTCCCTTGC GCCAGATCGC GCACGCCCCG TCGCCGTCCG GCGCAGCCAT GCCGAACGCG GCGACGCTCG TGACGGCACG CGGGCCCGGT TGGTGCGTGC CGGCATCGAG GCCGTGCTCG AACGCGGCTG GGCCGCCAGC GGCGTGGACG CAGTGCTGCG TTCGGCCGGG GTGCCGAAGG GTTCGTTCTA TCACTACTTC CCCAGCAAGG ATGACTTCGG CTATGCGGTG CTGGAGGGCT ACCAGGCGTT CTTCCTGAAG CGGCTCGAGC GCTGTTTCGG AGGAGAAGCG CCGACGGTGC GCCACGTCGA TGCGCAGTTC GCCGCCTTCC TGGCCGAGTC GCTCGAGGGC ATGGCGCGGC ACGGCTGGCA GCGCGGTTGC CTGGTCGGGG CGCTGGGCCA GGAACTGGGC GGGCTGCACG AGGGCTTCCG GCAGCGCCTG CTGGCCTCGC TCGACGAATG GGGCGAGGTG CTGGCGCGTG CGCTCGCCGC GGCGCAAGCG CGCGGCGAGG TGCGCCGCGG GCTCGACCCC GCGCTGGCCG CGCGCGGCTT CTGGACGGCC TGGGAAGGGG CCGTGCTGCG TGCCCGCCTG GCGCGTGACG GCGCGCCGCT GGAGGCCGCC ATTGCCGATT TCCGACGGCT CGTCGCCCCC GACTGA
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Protein sequence | MPASSLAPDR ARPVAVRRSH AERGDARDGT RARLVRAGIE AVLERGWAAS GVDAVLRSAG VPKGSFYHYF PSKDDFGYAV LEGYQAFFLK RLERCFGGEA PTVRHVDAQF AAFLAESLEG MARHGWQRGC LVGALGQELG GLHEGFRQRL LASLDEWGEV LARALAAAQA RGEVRRGLDP ALAARGFWTA WEGAVLRARL ARDGAPLEAA IADFRRLVAP D
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