| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2511 |
|---|
| Symbol | |
|---|
| ID | 4784907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2679917 |
|---|
| End bp | 2681257 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640091081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001021701 |
|---|
| Protein GI | 124267697 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACA GCCCCACCAT CGACGTTCGG AAGCTGCGGA TCGGACTCCA CGTTCACCTC
GACTTGGGGT GGATGGAGCA CCCGTTCCCG CTCAACAACT TCCGCATCTC GACCGAGCAG
CAGCTCGAGA CGCTGCGCGG GCTGGGCCTG GACCGCGTGC GCATCTCGCC GCAGCGCAGC
GACAGCACGA CGCTGCAGAG CCTGGTGGGC GAGGGCGTGC TGAGCGCCGA GGTCGCTGGC
GTCGAGGCGC CGGCGGCTGC GGCTGCCGAC GCCGACGCGG CGCCTGTCGT TCCGGTGGAA
ACGCCCGAAG CCGCTGAGCG CCGATTGCGC CGCGAGGCCC TGCTGGCCGA GCAGGCGTGT
GCGGCCCAGG CCGAACGCCA CTACAGCGAA GCAGGGCGCG TGCTGAGGCG CAGTTTCGAA
CTGGCGAGCA GCCAGCCGCA GGCCGCGCGC GAACAGACCG AGGCGCAGGT CAACGGCTTC
CTCGACAAGG TGCTCGGCGC CCAGGAAATG GCGATCCGCC TGCTCAACGA GGGCGCGGGC
GACCGCGGCT CGATGCACGC GATCAACGTC ACCGTGATCT CGCTGCTGCT GGGCAAGCAG
ATGGAACTCG GCAAGGCTGA GATGTTCGAC CTGGGCACCG GTGCGATGCT GCACGACATC
GGCAAGACCG AGCTGCCCGA TCGCGTGCGA TGGCTCGACC CGCTGTCGCC CAGTGTGTCC
AGCCACGAGC GGCAGTTCTA CCAGGAGCAT GTCTCGCACG GCGTGACGCT AGGCCGCAAG
ATGGCGCTGT CGCCCGGCGC GCTGCTGGTG CTCGCGCAGC ACCACGAATA CGCCGATGGC
ACCGGCTTTC CGCTCAAGCT CGGCGCCGAT CGGATGAGCG CCGCGGCCAA GATCGTCGCG
CTGGTGAATC GCTACGACAA CCTGTGCAAC CCGGCCACGC CGGCGCAGGC GCTCACGCCG
CACGAGGCAC TGGCGCTGAT GTACGGACAG ATGAAGGCCA AGTTCGACAG CGCGGTGTTC
GGCGCCTTCG TCAAGATGAT GGGCGTGTAC CCGCCAGGCT CCGTGGTGCA GCTGACCGAC
GACCGTTACG GCATGGTCGT CTCCGTCAAC TCGGCCCGGC CGCTCAAGCC CTGCGTGCTG
GTGCACGAGC CCAAGCAGCC GCGCAACGAG GCGGTGCCGC TGAACCTCGA GACCACGCCG
ACGCTCGGCA TCCGCCGCAG CCTGAAACCG CAACATCTGC CGCGCGCCAC GCTCGACTAC
CTGTCGCCGC GACCGCGCGT CTGCTACTTC TTCGAACGCG CCCGCGAGAC CGGCGCGCTC
GACGGCCGGG GCAGCGCATG A
|
|---|
| Protein sequence | MHDSPTIDVR KLRIGLHVHL DLGWMEHPFP LNNFRISTEQ QLETLRGLGL DRVRISPQRS
DSTTLQSLVG EGVLSAEVAG VEAPAAAAAD ADAAPVVPVE TPEAAERRLR REALLAEQAC
AAQAERHYSE AGRVLRRSFE LASSQPQAAR EQTEAQVNGF LDKVLGAQEM AIRLLNEGAG
DRGSMHAINV TVISLLLGKQ MELGKAEMFD LGTGAMLHDI GKTELPDRVR WLDPLSPSVS
SHERQFYQEH VSHGVTLGRK MALSPGALLV LAQHHEYADG TGFPLKLGAD RMSAAAKIVA
LVNRYDNLCN PATPAQALTP HEALALMYGQ MKAKFDSAVF GAFVKMMGVY PPGSVVQLTD
DRYGMVVSVN SARPLKPCVL VHEPKQPRNE AVPLNLETTP TLGIRRSLKP QHLPRATLDY
LSPRPRVCYF FERARETGAL DGRGSA
|
|---|
| |