Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2286 |
Symbol | |
ID | 4785771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2444656 |
End bp | 2446308 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640090854 |
Product | phenol-degradation regulator |
Protein accession | YP_001021477 |
Protein GI | 124267473 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGATC CTCTGTCGCT GCTGAGATTC AGTGCGGCAT CCGGGCACAT CTGGCTCGAC GAGCAGCGCA TGCTGCTGCT GCACGCGCGC GCGCTGGCCG CGCTGCGCAA GGAACTGTTC GACTCCCTGG GCGTCGAGCG CGCCCGAGGC CTGCTGGTGC GCATGGGCTT CGCTTCCGGC CGTCACGACG GCGAGCTGGC GGTCAAGCAG CGCGGCAGCG GCAAGAGCAA CGAGGAGGCC TTCCTGCTCG GGCCGCAGCT GCACGCGCTG GAAGGTGCGG TCAGCGTGGA GAAGGTGGCG CTCGAGATGG ACCTCGCCAC CGGCCACTTC TTCGGCGACT TCCTGTGGAC CAACTCCTGG GAGGACGAGG CCAACATCGC CGATTTCGGC TTCGGCGAGG AGCCGGCCTG CTGGACGCAG ATCGGCTACG CCTCGGGCTA CACCAGCGCC TTCATGGGCC GGCTGGTGGT GTTCAAGGAA ATGGAATGCC GCAGCCAGGG CGACAGCCGC TGCCGCATCA TCGGCCAGCC AGCCGAGGCC TGGCGCGACG AGGCCTATCT CAGCTACTTC CGCCCGCAGG TGATCGGTCA GCAGCTGATC GACTACAGCA TCGGCCTGGA GCAGCTGCGC GCGGTGCAGG CGAGGCGGCA GTACGACCGC AAGCTGATCG GCGTGTCGCC GGGCTTCCGC GCCGCCTTCG AGCTGCTGCG CAGCGCGGCC GGCAGCGCGA TCACCGTGCT GCTGCTGGGC GAGACCGGCG TGGGCAAGGA GATGTTCGCG CGCTGGCTGC ACGAGAACGG CCCGCGCGCC GGCGGCCCGT TCATCGCGGT GAACTGCGCT GCCATCCCGC ACGAGCTGAT CGAGGCCGAG CTGTTCGGCG TGGAGAAGGG CGCCTACACG GGGGCACAGC TGGCGCGCGC CGGGCGCTTC GAGCGCGCCA GCGGCGGCAC ACTGTTCCTC GACGAGGTGG GCGACCTGCC GCTGGCGGCC CAGGTGAAGC TGCTGCGCGC GCTGCAGACC GCCGAGGTGG AGCGGCTCGG CTCCGAGCAC GCCACCAAGA TCGACGTGCG CATCGTTGCG GCCACCAATG TCGACCTGCA GCAGGCGATG CAGGCCGGCC GCTTCCGCAG CGACCTGTTC TACCGGCTCA ACATCTTCCC GATCACCATC CCGCCGCTGC GCGAGCGCAC CACCGACATC CCGGCGCTGA TCGAGCGCTT CCTGGAGAAA TACGGTGAGC TCTACAACAA GAAACTGCGC GGCCTGACCG ACAAGGCGAT GCGCCAGGTG CTGAGCCACG CCTGGCCCGG CAACATCCGC GAGCTGGAGA ATGTGATCGA GCGCGCCGTG CTGCTGGCGC CGGCCAACGG CCCGATCGAG GCCTGTCACC TGTTCGGTGA ACCGGCGCTG CGCGCCAGCG AGGGCAGCCT GGATGCGAAG GGCCGCGTGA CCGAGGTCCA CCCCGACGCC CTCGGCCGCC TGTGCGACGA GGCCTTCGAG CACCACATCG ACCTCGAGTC GCTGGAGCGC CGCATGATGC AGGCGGCGAT GCAGCGCGCC AAGGGCAACC TGTCGCAGGC CGCGCGCCTG CTCGGCATCA CCCGACCGCA GCTGGCCTAT CGGCTCAAGA AGGAAGGCCT GCCGACCGGC TGA
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Protein sequence | MGDPLSLLRF SAASGHIWLD EQRMLLLHAR ALAALRKELF DSLGVERARG LLVRMGFASG RHDGELAVKQ RGSGKSNEEA FLLGPQLHAL EGAVSVEKVA LEMDLATGHF FGDFLWTNSW EDEANIADFG FGEEPACWTQ IGYASGYTSA FMGRLVVFKE MECRSQGDSR CRIIGQPAEA WRDEAYLSYF RPQVIGQQLI DYSIGLEQLR AVQARRQYDR KLIGVSPGFR AAFELLRSAA GSAITVLLLG ETGVGKEMFA RWLHENGPRA GGPFIAVNCA AIPHELIEAE LFGVEKGAYT GAQLARAGRF ERASGGTLFL DEVGDLPLAA QVKLLRALQT AEVERLGSEH ATKIDVRIVA ATNVDLQQAM QAGRFRSDLF YRLNIFPITI PPLRERTTDI PALIERFLEK YGELYNKKLR GLTDKAMRQV LSHAWPGNIR ELENVIERAV LLAPANGPIE ACHLFGEPAL RASEGSLDAK GRVTEVHPDA LGRLCDEAFE HHIDLESLER RMMQAAMQRA KGNLSQAARL LGITRPQLAY RLKKEGLPTG
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