| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2069 |
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| Symbol | |
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| ID | 4784644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2214872 |
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| End bp | 2216086 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640090637 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_001021260 |
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| Protein GI | 124267256 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.473909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGA AGACCACCAT GGCCTACACC GCCGGTGCGC TGCTGGCAGC GGCTTTGCTG
CTGACCTGGG CCTTCGCGCC GCGGCCGATG GACGTGCAGA CGGCCCAGGC CAGGCTCGGC
CGCTTCGAGG CCGCGATCGA GGAGGACGGG CGCACGCGGC TGCGCGAGCG CTACCTCGTC
TCGGCGCCGC TGGCGGGCCG ACTGCGGCGC ATCGAGCTCC ACGAGGGCGA CCGCGTGCAA
GCCGGCGCGG TTCTCGCCAT GCTCGACCCG GTGCTGCCGC CGATGCTGGA CGAACGCACG
CTGCGCGAAC AGCAGTCGCA GCTCGAGATC GCGCGAGCCA ACGTGCAGCG CGCCGGCGCC
CGCGCTGCGC GCGCCGCGGT CGCGCGGCTG CAGGCCGCGC ACGACGCCAG CCGCAGCGCC
GAGCTTGCGC AGCAGGGCTT CGTTGCCATG ACGCGGCTGG AATCCGACCG CCTGGCGCTC
GCCGCCGCCG AGCGCGAAGT CGATGCGGCC GAGAGCGAGC GGCTGGTTGC AGTGCATGGC
GTCGAGCAAG CCCGCGCCGC GCTCGCCGCC GTGCGGCAGC CCACGCCCGG GCGCGCCTTC
ACGCTGCGGG CACCGGTGGC AGGCACGGTG CTGCGGGTCG CGCAGGAGAG CGAGGCCAGC
GTCGCCACCG GCGCGCCACT GATGGAACTG GGCGACGTAC GTGAACTGGA AATCGTGGCA
GAGCTCTTGA CCGCCGACGC GCTGCAGGCC GCGCCCGGCA GCCGCGTGCT CATCGAGCGC
TGGGGCGGCG AAGGCGTACT CGAAGGACGC GTGCGCCGCG TCGAGCCGGC CGCGTTCACC
AAGGTCTCGG CGCTCGGCGT CGAGGAACAG CGCGTGCGCG TGCTGATCGA TCTGGTTGCG
CTCGAGCGAG CGCCGGCGCG CTGGCGCTTG CTCGGAGACG GCTTCCGTGT CGGCGTGCGC
ATCATCACGG TGTCCGAAGA ACAGGCGGTC GTGGTTCCTG TCAGTGCGGT GTTCCCGTCG
GTCGACGATG GCGGCGCGGG CGCTGCCGTG ATGGTGGTCG AAGACGGCCG TGCCCAACTG
CGCCGCGTCG ATCTGGGCGC ACGCAATGGC AGCCAGGCCT GGCTCCGCGG GGGGCTGGCC
GCAGGCGCCA CGGTCATCGT CTACCCACCG CCAGCGCTGC AGCCGGGCCA GCGGGTACGC
GGGAAGGCCG GCTGA
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| Protein sequence | MIKKTTMAYT AGALLAAALL LTWAFAPRPM DVQTAQARLG RFEAAIEEDG RTRLRERYLV
SAPLAGRLRR IELHEGDRVQ AGAVLAMLDP VLPPMLDERT LREQQSQLEI ARANVQRAGA
RAARAAVARL QAAHDASRSA ELAQQGFVAM TRLESDRLAL AAAEREVDAA ESERLVAVHG
VEQARAALAA VRQPTPGRAF TLRAPVAGTV LRVAQESEAS VATGAPLMEL GDVRELEIVA
ELLTADALQA APGSRVLIER WGGEGVLEGR VRRVEPAAFT KVSALGVEEQ RVRVLIDLVA
LERAPARWRL LGDGFRVGVR IITVSEEQAV VVPVSAVFPS VDDGGAGAAV MVVEDGRAQL
RRVDLGARNG SQAWLRGGLA AGATVIVYPP PALQPGQRVR GKAG
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