| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2028 |
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| Symbol | |
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| ID | 4784248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2169833 |
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| End bp | 2170444 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640090598 |
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| Product | cold shock DNA-binding domain-containing protein |
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| Protein accession | YP_001021221 |
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| Protein GI | 124267217 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1278] Cold shock proteins
[COG3326] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.344773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTCG ACGGCAAACT CAAATCCTGG AACGATGAGC GCGGTTTCGG CTTCATCGAT
CCGGTTCATG GTGGGCAGGA TATCTTCGTC CACATCAAGG CCTTTCCTTC AGGAACCGGT
CGACCTACCG TCGGGCAGGC CGTAACTTTC GAGGTAGAAC TCGGCCCCAA CGGAAAGAAG
CGCGCGCGCT CGGTGCAGTA CCCGGTGCGT GGTCGATCCC GCAAGCCGCT GCGCTCCGAA
GCCCCGGCTG ACTGGACGCT CCCCCGACTA CTCGCTATTC CCGCATTCGT CGCGATCTAC
TACGTTGTGG CGAGTCACTG GCCGGTCAAG CCGGTCGTCG CGGCCATCTA CGTGTTCGTC
AGTCTTGTTG CCTTCATGGC ATACGCGCTG GACAAGTCAG CGGCCATCCA GAAGCGCTGG
CGAACGTCCG AAGGAACACT GCTCCTCATC GGGCTCGCCT GCGGCTGGCC CGGATCCCTG
GTCGCGCAGC AGTTCCTGCG GCACAAGTCC TCCAAGCCGA GTTTCGTGGC CGCATTTTGG
TTGACTGTGC TGCTGAATGT CGCGGGGTTC GTCGTCCTGC ATGCGGGTGT GCTTCCGCTG
CCGTGGTTGT GA
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| Protein sequence | MRLDGKLKSW NDERGFGFID PVHGGQDIFV HIKAFPSGTG RPTVGQAVTF EVELGPNGKK
RARSVQYPVR GRSRKPLRSE APADWTLPRL LAIPAFVAIY YVVASHWPVK PVVAAIYVFV
SLVAFMAYAL DKSAAIQKRW RTSEGTLLLI GLACGWPGSL VAQQFLRHKS SKPSFVAAFW
LTVLLNVAGF VVLHAGVLPL PWL
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