| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1980 |
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| Symbol | |
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| ID | 4783767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2119586 |
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| End bp | 2120947 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640090550 |
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| Product | amidase |
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| Protein accession | YP_001021173 |
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| Protein GI | 124267169 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.078778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG ACCTGCTCTC CCGGCGCGCC CGGGTGCTTG ACGGCACGAG CAGCGCCGGC
GCGGAGATCG AGCGCTCACT GCAGCACGCA GCCTCCGCTG CCGTAGCCCC GGCCTTCCTG
AAGATCGATG CTGTCGGCGC GCGAGCCGCG GCCCGCGCCG TCGACGCCGC GATCTCCAGC
GGCGCCCCGC TGCTGCCGCT CGCCGGTCTG GCCGTCAGCA TCAAGGACCT GTTCGACATC
GCCGGTCAGG TCACGACCGC GGGCTCCACG GTACTGACCG ATGCCGAACC GGCTGCGCAG
GACGCGCCCG CGGTGTCGCG GCTGCGGGCC GCCGGCGCAG CGCTGATCGG CCGCACCCAC
ATGACCGAGT TCGCGTTCTC GGGCGTTGGT CTCAATCCGC ATTACCCCGC GCCGGCCAAC
GTGCCAATGG CGACCCTGGA CCGCGACACA CCGCGCATCC CGGGCGGCTC CAGTTCCGGC
GCGGCGGTTT CGGTGGCGAG CGGGGCTGCG TGGGCGGCGT TGGGCTCGGA CACCGGCGGT
TCGGTGCGAA TCCCCGCCGC ATTGCAGGGT CTGGTCGGCT TCAAGAACAC CGCGTCGCTG
ACGCCGACCG AAGGTGCCAT ACCGCTGTCC ACCACGCTCG ACACGGTCTC GGCCCTGACG
CGCTCGGTGC GCGACGCCGT ACTGCTGCAC GAGTTGCTGT CAGCCCGCCG CGTTGCGCTG
CCTGGCCGGC CGCTGAGGGC CACCCGGCTC GCAGTGCCGA CAACGCTGAT GCTCGACGCG
CTGGAGCCTG CCGTGGCCGC GGCCTTCGAA CGCGCCGTGG ACCGGCTGTC GCGCGCCGGC
GCGCAGATCG TCACGCTCGA CGTCCCGCCG CTGGCCGACC TGGCGCCGCT GCAGGTCAAC
GGTGGTTTCG CGAGCTGCGA AAGCTGGGCC TGGCACCGGC ACCGGCTCGC GACTCACGAA
GCCGACTACG ACCGCCGCGT GGTGACGCGC ATCCGCCGCG GCATGGCCAT GAGCGCGGCG
GACTACATCG ACCTGCAGAA GGCACGCGCC GCCTGGATCG CTCGCATGCA CGCGGCGCTG
CGTGGTTTCG ACGCGGCGCT GTCCCCGACC GTGCCGATCC TCGCGCCACC GATCGCGGCG
CTGGAAGCGA GCGACGAGGA ATTCTTCCGC GTCAACTCGC TGCTGCTGCG GAACCCCTCG
GTCGTGAACT TGCTCGACGG CTGCGCGATC AGCCTGCCCT GCCAGGCGCC GGGCGACGCG
CCAGTCGGCC TGATGCTGTG GTCGCGCGGC CATGCCGACG ACGCCCTGCT CGACATGGCC
CTGGCCGTCG AAGCCGCGCT GGCCAATGGA GCATTCTCAT GA
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| Protein sequence | MTDDLLSRRA RVLDGTSSAG AEIERSLQHA ASAAVAPAFL KIDAVGARAA ARAVDAAISS
GAPLLPLAGL AVSIKDLFDI AGQVTTAGST VLTDAEPAAQ DAPAVSRLRA AGAALIGRTH
MTEFAFSGVG LNPHYPAPAN VPMATLDRDT PRIPGGSSSG AAVSVASGAA WAALGSDTGG
SVRIPAALQG LVGFKNTASL TPTEGAIPLS TTLDTVSALT RSVRDAVLLH ELLSARRVAL
PGRPLRATRL AVPTTLMLDA LEPAVAAAFE RAVDRLSRAG AQIVTLDVPP LADLAPLQVN
GGFASCESWA WHRHRLATHE ADYDRRVVTR IRRGMAMSAA DYIDLQKARA AWIARMHAAL
RGFDAALSPT VPILAPPIAA LEASDEEFFR VNSLLLRNPS VVNLLDGCAI SLPCQAPGDA
PVGLMLWSRG HADDALLDMA LAVEAALANG AFS
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