| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1801 |
|---|
| Symbol | |
|---|
| ID | 4786800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1938499 |
|---|
| End bp | 1939005 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640090372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020995 |
|---|
| Protein GI | 124266991 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0113627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CAAGCGACGC ACTGTTCAAG AAACTGGCCA ACGACCTGGG CGTGGAGTTC
TCCGAGGAGA TTCGCGCCGT GCCGCACTAC GAGGTGTCGG TCGAGCACGA CGGCATCCTC
TACGTCAGCG GCCAGATCCC GCGCATCCGC GGTGCGGTAG CGGTGGCAGG GCGCGTCGGC
GCCGAGATCT CGCGCGAGGA GGCCCGCCAT GCGGCCCGCA TCTGCGTGGT GAAGGCGCTG
GCCGTCGTGC GCCAGGCCGC CGGCGGCGAC CTGAGCCGCG TGAAGCGCAT CCTGCGCATG
ACGGTCTACG TGCAGAGCGC GCCGAACTTC ACCGAGCACA GCGAGGTGGC CGACGCCGCC
TCGGACATTC TCTACACGCT GTTCCAGCCG GGCGGCGGCC ACACCCGCAC CACGGTCGGC
GTGGCCCAGC TGCCCAAGAA CGCGGCGGTC GAGATCGACA TGATCGTCGC GCTGGGCGAC
CGCGAGGCGG GCAGCAGCAC GTTCTGA
|
|---|
| Protein sequence | MSTASDALFK KLANDLGVEF SEEIRAVPHY EVSVEHDGIL YVSGQIPRIR GAVAVAGRVG
AEISREEARH AARICVVKAL AVVRQAAGGD LSRVKRILRM TVYVQSAPNF TEHSEVADAA
SDILYTLFQP GGGHTRTTVG VAQLPKNAAV EIDMIVALGD REAGSSTF
|
|---|
| |