| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1466 |
|---|
| Symbol | |
|---|
| ID | 4784064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1583290 |
|---|
| End bp | 1584279 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640090033 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001020663 |
|---|
| Protein GI | 124266659 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.624133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CCACGACGAC GACCTCCTCC CGCAACGCCG ACCCCGACTT CTGGCAGCGC
GCCCGCCGGC ACCTCATACG CTACGGTGGC ACGTTCGAGC CCATGATCAT CGAGCGCGCC
CAAGGCAGCT TCGTCTACGA CGCCGACGGC CGCGCGATCC TCGATTTCAC CTCGGGCCAG
ATGAGCGCGC TGCTCGGCCA CGGCCACCCC GAGATCGCCG CGGTGGTGGC CGAGCACGCC
CGCTCGCTGG ACCACCTGTT CAGCGGCATG CTGAGCCGCC CGGTGGTGGA CCTGGCCACG
CGCCTGGCCG GCGTGGCGCC GGCCGGCCTG GAGCGCGCCA TGCTGCTGAG CACCGGCGCC
GAGGCCAACG AGGCCGCGAT CAAGATGGCC AAGCTCTACA CCGGCAAGTA CGAGGTGGTG
AGCTTTGCGC AGTCTTGGCA CGGCATGACC GGCGGCGCGG CGTCAGCCAC CTACAGCGCG
GGCCGCAAGG GCTACGGGCC GGCCGCGGTG GGCTCGTTCG CGATCCCCGC GCCCTACCCC
TACCGCCCGC GCTTCGAGCG CGACGGCCGC TTCGACTGGC AGGCCGAGCT GGACTACGCC
TTCGACCTGA TCGACCGCCA ATCGAGCGGC AACCTCGCGG CCTTCATCGC AGAGCCCATC
CTCAGCTCGG GCGGGCTGAT CGACCTGCCG CTGGGCTACC TGGCCGCGCT GAAGGCCAAG
TGCAGCGAGC GCGGCATGCT GTTGATCCTG GACGAGGCGC AGACCGGCGT GGGCCGCACC
GGCCTGATGT TCGCGTGCCA GCGCGACGGC GTGGTGCCCG ACATCCTCAC GCTGTCCAAG
ACCCTGGGTG TTGACGATCG CCCAGAACTG ACCCGCTGCG ATCATTCAAT ACTGACCCAC
CCCTGTAGGC TACCCGAGGG TGCCTTGGTC TGTGGATATC TCTGCGGTTC TGGGGTCTTG
GGTCGGTCCT TTCCTGCGTT GCGTCGTTGA
|
|---|
| Protein sequence | MTTTTTTTSS RNADPDFWQR ARRHLIRYGG TFEPMIIERA QGSFVYDADG RAILDFTSGQ
MSALLGHGHP EIAAVVAEHA RSLDHLFSGM LSRPVVDLAT RLAGVAPAGL ERAMLLSTGA
EANEAAIKMA KLYTGKYEVV SFAQSWHGMT GGAASATYSA GRKGYGPAAV GSFAIPAPYP
YRPRFERDGR FDWQAELDYA FDLIDRQSSG NLAAFIAEPI LSSGGLIDLP LGYLAALKAK
CSERGMLLIL DEAQTGVGRT GLMFACQRDG VVPDILTLSK TLGVDDRPEL TRCDHSILTH
PCRLPEGALV CGYLCGSGVL GRSFPALRR
|
|---|
| |