| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1346 |
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| Symbol | tolB |
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| ID | 4785452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1451034 |
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| End bp | 1452299 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640089912 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001020543 |
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| Protein GI | 124266539 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCC GCAGCTTGGT GGCACTGCCG CTCGCCGCGG CGCTGCCGTC CGCGCTGGCC
CAGTTCCGCG TCGAGATCTC CGGCGTCGGC GCCACGCAGT TGCCGATCGC CGTCGTGAAG
TTCCGCGACG AGGAGAAGGC GCCGCAGCCG GTGGGCGCCA TCGTGCGGGC GGATCTCGAG
CGCAGCGGGG TGTTCCGCAA TCTCGACACC TCCGGCGTGG TGCTCGACGA AGGTTCCCAG
CCGGCGATGA GCGACTGGCG CGGCCGCAGC GCCGATGCGC TGGTCGGCGG CTCGGTGACG
CGCCTGGCCG ATGGCCGTTT CGATGTGCGC TACCGTCTGT GGGACGTGGT GAAGGGCCGC
GACCTCGGCG GCCAGAGCTA TGCGGTCCCT GCCGGCGATC TGCGGCTCGC GGCCCACCGC
ATCGCCGACG CCATCTACGA GAAGCTCACC GGCGAGAAAG GCGTGTTCTC GACGCGCATC
GCCTACGTCA CCAAGGGCGG CGGTCGCTTC ACGCTGTGGG TGACCGACGC CGACGGCGAG
GGCGGCCAGT CCGCGCTGGC CAGCCCCGAA CCCATCATCT CGCCGGCCTG GTCGCCCGAT
GGTCGCGAAC TGGCCTACGT GTCGTTCGAG AGCCGCAAGG CCGTGGTCTA TGTGCAGGAG
GTCGCCAGCG GCAAGCGCCG CACGCTGGCG AGCTTCCGCG GCTCGAACAG CGCGCCGGCG
TGGTCGCCCG ACGGCCGCCA GCTCGCGCTG ACCCTCAGCC GCGACGGCGG CTCGCAGCTC
TTCGTGATGG GGCGCGACGG CGAGGGCGTG AAGCGCCTGA CCAGCAGCGG TGCGATCGAC
ACCGAGGCCA CGTGGGCGCC GGACGGCAAA TCGATCTATT TCGTCAGCGA CCGGGGCGGC
AGCCCGCAGA TCTACCGCGT GCCGGCCGGT GGCGGCAATG CCGAGCGGGT GAGCTTCAGC
GGCAGCTACA ACATCAGCCC GGCGATCAGC CCGGACGGCC GCACGATGGC CTACATCTCG
CGCGACGGCG GCGCCTTCCG GGTGCAGGTG ATGGACCTCG CCAGCGGAAC CGCCCGCGCG
GTGAGCGACA CCAAGGACGA CGAAAGCCCC AGCTTCGCGC CGAACGGCCG ACTCATCATC
TACGCCACCC GAGACGGTGG CCGCGATGTG CTGATGACCA CCACGACCGA CGGCAAGATC
AAGGCCCGCC TCGTGTCGAC CCAGGCTGAT GTGCGCGAGC CGGTCTGGGG CCCCTACGGA
CGCTGA
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| Protein sequence | MLRRSLVALP LAAALPSALA QFRVEISGVG ATQLPIAVVK FRDEEKAPQP VGAIVRADLE
RSGVFRNLDT SGVVLDEGSQ PAMSDWRGRS ADALVGGSVT RLADGRFDVR YRLWDVVKGR
DLGGQSYAVP AGDLRLAAHR IADAIYEKLT GEKGVFSTRI AYVTKGGGRF TLWVTDADGE
GGQSALASPE PIISPAWSPD GRELAYVSFE SRKAVVYVQE VASGKRRTLA SFRGSNSAPA
WSPDGRQLAL TLSRDGGSQL FVMGRDGEGV KRLTSSGAID TEATWAPDGK SIYFVSDRGG
SPQIYRVPAG GGNAERVSFS GSYNISPAIS PDGRTMAYIS RDGGAFRVQV MDLASGTARA
VSDTKDDESP SFAPNGRLII YATRDGGRDV LMTTTTDGKI KARLVSTQAD VREPVWGPYG
R
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