| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1288 |
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| Symbol | |
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| ID | 4785010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1390739 |
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| End bp | 1391569 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640089854 |
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| Product | putative terpenoid synthase-related protein |
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| Protein accession | YP_001020485 |
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| Protein GI | 124266481 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.382378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0912126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG ATCACTACGA GAACTTTCCT GTCGCCTCGC TGCTCTGCCC ACCGGCCCTG
CGGCCGGCCG TGACGGCGGT CTACCACTAC GCCCGCACGG CGGACGATCT GGCCGACGAG
GGCGATGCGC CCGCCGCGCA GCGGCTCTCC GACCTGGCGG CTTACCGCGC CGACCTGCAT
GCCGTCGCCG CCGGCGCGGC GGTCTCGCAA CGCTGGGCCG CCGTGTTCGA GCCGCTGTCC
GTCGCGATCG CGAAGCACGC GTTGCCGCTG CCGCTGCTGG AGGACCTGCT CGACGCCTTC
GTGCAGGACG TGGTCCAGAC CCGCTATTCC GACCGCGCCG AACTGCTGGA CTACTGCCGC
CGCTCGGCCA ATCCAGTGGG ACGGCTGCTG CTGCACCTGT ACGGCGTGCA GGACGCCGAC
AGCCTGCAGC GCTCCGATGC GATCTGCAGC GCGCTGCAGC TCATCAATTT CTGGCAGGAC
CTGAGCATCG ACCTGCCGCG CGGCCGGCTC TACATTCCGC TCGACCAGTG CGCTGCCCAC
GGCGTCGACG AGGCCGCGCT GTTCCTGCAG CACGACAGCG TCGCCAGCCG GGCATTGGTG
CAGGCGCAAT GCGCCTGGAC GCGCGGGCTG ATGCTGAGCG GCGCGCCGCT GGTCCACCGG
CTGCCGGGCC GGGCCGGCTG GGAACTGCGC GGCGTGGTGC AGGGCGGCCT GCGCATCGTC
GACAAGATCG AGGCCCTGCA GTTCGCCACG CTGCGCCGGC GGCCGCGGCT GCGGGCGCTG
GACGGACCGC TGATCGCCTG GCGTGCCTGC CGCATGCGTG CACGCGCCTG A
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| Protein sequence | MSVDHYENFP VASLLCPPAL RPAVTAVYHY ARTADDLADE GDAPAAQRLS DLAAYRADLH
AVAAGAAVSQ RWAAVFEPLS VAIAKHALPL PLLEDLLDAF VQDVVQTRYS DRAELLDYCR
RSANPVGRLL LHLYGVQDAD SLQRSDAICS ALQLINFWQD LSIDLPRGRL YIPLDQCAAH
GVDEAALFLQ HDSVASRALV QAQCAWTRGL MLSGAPLVHR LPGRAGWELR GVVQGGLRIV
DKIEALQFAT LRRRPRLRAL DGPLIAWRAC RMRARA
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