| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1234 |
|---|
| Symbol | |
|---|
| ID | 4785135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1329943 |
|---|
| End bp | 1331133 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640089800 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_001020431 |
|---|
| Protein GI | 124266427 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAC GCTACATCGC CCACCTCGAC ATGGACGCGT TCTACGCGTC GGTCGAGTTG
CTGCGCTATC CGGAACTGAA AGGCGAGCCG GTGGTCATCG GCGGGGGCCG GCGCCACGAA
CCGGAGGTGC TGGCCGACGG CAGCCGCCGC TACGCGACGC TGCGCCACTA CGCCGGCCGT
GGCGTCGTCA CCACCGCCAC CTATGCGGCG CGCCGCTACG GCGTGAACTC CGGCATGGGA
CTGATGAAGG CGGCCGCCCT GGCGCCCGAC GCGGTGCTGC TGCCGGTCGA CTTCGACGAG
TACCGGCGCT ACTCGCGCCT GTTCAAGGCG GCGGTGGCCG AGGTCGTGGG CAACACGCCA
CCGCTGATCG AGGACCGCGG CGTCGACGAG ATCTACATCG ATCTCTCGGC CCTGCCCGGT
GTCGCGGTCG ACCGCGGCGC GACGCTGGCG CGCGCCATCA AGGCCCGCGT GCTGGAAACC
ACCGGCCTCA GCTGCTCGAT CGGCGTCACG CCCAACAAGC TGCTGAGCAA GCTCGCCTCC
GAACTCGACA AGCCCGACGG CCTGACGATC CTGCGCGAGG CCGACATCGA GACACGCATC
TGGCCGCTAC CGGCCCGGCG CATCAACGGC ATCGGGCCGA AGGCCTCGGC GAAGCTCGAG
GCCCTGGGCA TCCGCACGAT CGGCGAGCTG GCCGCCGCCG ACGCGGCCTG GCTGCTGAAG
AACTTCGGCG CCCACTACGG CGCCTGGCTG CATGCCGCCG CCCACGGCCG CGACGAACGG
CCGGTGGTGA CGCACAGCGA ACCGGTCAGC CTGAGCCGCG AGACCACGTT CGACCGCGAC
CTGCACCCGC GCAACGACCG CGCAGCGCTG TCGGCCATCT TCACGCGGCT GTGCGAGCAG
GTGGCCGACG ACCTGCAGCG CAAGGGTTAC GTCGGCAGGA CCATCGGGCT GAAGCTGCGC
TACGACGACT TCAGGACGGT GACCCGCGAC CTCACGCTGC CGGCCCCGGT CGACGACCTC
GCGGCGATCC GTCGGGCGGC CGGCGAATGC CTCAAGCGCG CCCCGCTCGA GCGACGCCTG
CGCCTGCTGG GCGTGCGGGT CGGCTCGCTG TCGCGCCCCG GCGAGCTTGT CCCACCCGAC
GCAGCGAAGC CGGCCGCGCA GCCGCATACG CGATCGCTGT TCGACGACTG A
|
|---|
| Protein sequence | MPERYIAHLD MDAFYASVEL LRYPELKGEP VVIGGGRRHE PEVLADGSRR YATLRHYAGR
GVVTTATYAA RRYGVNSGMG LMKAAALAPD AVLLPVDFDE YRRYSRLFKA AVAEVVGNTP
PLIEDRGVDE IYIDLSALPG VAVDRGATLA RAIKARVLET TGLSCSIGVT PNKLLSKLAS
ELDKPDGLTI LREADIETRI WPLPARRING IGPKASAKLE ALGIRTIGEL AAADAAWLLK
NFGAHYGAWL HAAAHGRDER PVVTHSEPVS LSRETTFDRD LHPRNDRAAL SAIFTRLCEQ
VADDLQRKGY VGRTIGLKLR YDDFRTVTRD LTLPAPVDDL AAIRRAAGEC LKRAPLERRL
RLLGVRVGSL SRPGELVPPD AAKPAAQPHT RSLFDD
|
|---|
| |