| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1190 |
|---|
| Symbol | |
|---|
| ID | 4785591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1287269 |
|---|
| End bp | 1288147 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640089755 |
|---|
| Product | ParB-like nuclease |
|---|
| Protein accession | YP_001020388 |
|---|
| Protein GI | 124266384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.411537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGTG TTGCCTTGGG TTTTGTGCCG GCGCCGCTGG TGGTGCCGTT GGATCGGATC
CTGCCTTCGC GCAAGGTGCC GGCTGGTCTG GCGACGTCGC GGAAGTTCAG GCAGATCCGG
GCGTCAATCC AGGAGATCGG GCTGATTGAG CCGCTCTCCG TTGCGGCGAT GGACGCCGGC
ACGGGCCAGC ACCTTCTACT AGACGGGCAC GTGCGGCTGG TGGTGCTGCG CGACCTGGGG
CAGGAGGACG CACCCTGCTT GGTCGCCACC GACGACGAGG CTTACACCTA CAACAACCGG
ATCAACCGCC TGTCGACGAT CCAGGAGCAC TACATGATCC GACGCGCGAT CGATCGGGGT
GTCTCACCCG AACGGTTGGC CAGCGCGCTC AGTGTGGACG TGAGCCATAT CGCCAAGAAG
GTGAACCTCC TGGACGGGAT CTGCCCGGAG GCTGTCGAGC TCTTCAAGGA CCGGCAGTTC
TCGGCTGAGC TGGGCCGGGT GATCCGCAAG ATGAAGCCGA CGCGCCAGGT GGAGTGCGCG
GAGTTGATGA TTTCCGCGAA CAACCTCACT GTGGCCTATG CCGAGGCGCT GCTTGTCGCG
ACTTCAGCGT CGGCCTTGGT GGACGGAATG CGGCCACGGA AAGTGAGCGG CGTGACGCCC
GAGCAGATGG CGCGCATGGA GCGCGAGATG GCGAACCTGC AGGGCCAGTA TCGGTTGGTC
GAGCAGTCGT ACGGGCAGGA CGTGTTAAAC CTTGTCTTGG CCAGGGGCTA CCTCGCCAAG
CTTCTTGAGA ACGCGAAGGT GGCGAAGTAC CTGAAGCAGC AGCAGCCGGA GATGTTGGAG
CAGTTTGCGG CGATCGTGGA AGCCACAGCG CTGGAGTAG
|
|---|
| Protein sequence | MTGVALGFVP APLVVPLDRI LPSRKVPAGL ATSRKFRQIR ASIQEIGLIE PLSVAAMDAG
TGQHLLLDGH VRLVVLRDLG QEDAPCLVAT DDEAYTYNNR INRLSTIQEH YMIRRAIDRG
VSPERLASAL SVDVSHIAKK VNLLDGICPE AVELFKDRQF SAELGRVIRK MKPTRQVECA
ELMISANNLT VAYAEALLVA TSASALVDGM RPRKVSGVTP EQMARMEREM ANLQGQYRLV
EQSYGQDVLN LVLARGYLAK LLENAKVAKY LKQQQPEMLE QFAAIVEATA LE
|
|---|
| |