| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1167 |
|---|
| Symbol | |
|---|
| ID | 4785566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1249753 |
|---|
| End bp | 1250379 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640089730 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020363 |
|---|
| Protein GI | 124266359 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.382015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC AACCGATCCA GTTCGCCACC CCGGCCGACG ACCGCGAGGA ACTCGCGCGG
GCCGAGATCT ACGGCCTGCT CGCGCAGCTG TTCGTCGCTC CGCCCGATGC CGCCTTCCAC
GCACAGCTGC GCGTGGCGCC CACCGAGGCG CCCACGCCCG GCGGCTTTCT CGAGCCGGCC
TGGGGCGAGG TGGTGGCGGC CGCGCGGCGC GTGCCGCCGG ATGCGGTGGC CGCCGAGTAC
GACGCGCTGT TTCTGGGCGT CGGGCGGGCC GAGATCTTTC TCTACGGCTC CTTCCATCTG
GCCGGCGCGC TGAACGACCG GCCGCTGGTC GAGCTGCGCG CGGACCTGCG CACGCTGGGC
CTGGAGCGCG CCGACGGCGT GAGCGAGACC GAGGACCACA TCGCCAGCGT GTGCGAGGTG
ATGCGCTTCC TGATCGCCGG CGACGACCCC GAGATCTGCA ACCTGGAGCA GCAGCGGCGC
TTCTTCCGCA TCCACCTGCA GACCTGGGCC GAGGCGCTGT GCGCTGCCAT CGAGGCGCAC
CCGCGCGCCG ACTTCTACCG CGCCGTGGCC GGTTTCCTGC GTGCCTTCGT CGAGGTGGAG
ACGCAGGGCT TCGACCTGAT CGACTAG
|
|---|
| Protein sequence | MKPQPIQFAT PADDREELAR AEIYGLLAQL FVAPPDAAFH AQLRVAPTEA PTPGGFLEPA
WGEVVAAARR VPPDAVAAEY DALFLGVGRA EIFLYGSFHL AGALNDRPLV ELRADLRTLG
LERADGVSET EDHIASVCEV MRFLIAGDDP EICNLEQQRR FFRIHLQTWA EALCAAIEAH
PRADFYRAVA GFLRAFVEVE TQGFDLID
|
|---|
| |