Gene Mpe_A1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1100 
Symbol 
ID4783704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1179418 
End bp1180206 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content73% 
IMG OID640089663 
Producthypothetical protein 
Protein accessionYP_001020296 
Protein GI124266292 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA GCCTGCATTT CGCGCGGGAT CCGGCCGATC CCCGCATCGG CGTCCTGACG 
CTGTCGAACG CGGGCAAGCT CAACGCGATC GGCGTCGCCA TGTGGCGCGA GCTCGGGACG
CTGGCGGCGA CGCTGGATGC GCTGCAGCCG ACGCTGCACG CGGTGATCGT CCGTGGCGAG
GGCGGCGACT TCGCGGCCGG AGCCGACATC GCAGAGTTCC CGGCGCACCG CTTCTCCACC
CAGGCGCTGC GCGACTACCA CGAGCGCCTG GTCGCGCCGG CACTGCACGC GCTGCTCGCG
ACGGACGTAC CGCTCGTGGC GCAGATCGAG GGGGGCTGCA TCGGCGGCGG CCTGGAGATC
GCCGCCTGTT GCGACCTGCG CATCGCCCGG CGCGGCGCGC GCTTCGGCAT CCCGATCGCC
CATCTCGGCT TTCCGATGGC GCCCGACGAA CTTGCGGTGG TGCTGAGCGC GGTGGGCCGG
GCGAACGCGG CCGAACTGCT GCTGGAGGCC CGCCTGCTGG ACACCGACGA GGCGCTGCGG
CGCGGCCTGG TACAGCGCGT CGTGGACGAC GTGGCAGCCG AGGCCGCCGC CACGGCTCGG
CGCATCGCTG CGCTGCCGGC GTCGGTGGCG CGTGCCAACA AGCGCACGCT GCGCCAGTTG
CTGAGCGGCG GGCCGACAGA CGCCGAGCGC GCGCGACACT TCGGCTATGC CGACAGCGCA
ACGCATCTCG AAGGCGTGCA GGCCTTCCTG GATCGGCGCC GGCCGGTGTT TCCGGACGAT
CCGGTATGA
 
Protein sequence
MSGSLHFARD PADPRIGVLT LSNAGKLNAI GVAMWRELGT LAATLDALQP TLHAVIVRGE 
GGDFAAGADI AEFPAHRFST QALRDYHERL VAPALHALLA TDVPLVAQIE GGCIGGGLEI
AACCDLRIAR RGARFGIPIA HLGFPMAPDE LAVVLSAVGR ANAAELLLEA RLLDTDEALR
RGLVQRVVDD VAAEAAATAR RIAALPASVA RANKRTLRQL LSGGPTDAER ARHFGYADSA
THLEGVQAFL DRRRPVFPDD PV