| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0807 |
|---|
| Symbol | |
|---|
| ID | 4784491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 845877 |
|---|
| End bp | 846872 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640089368 |
|---|
| Product | vanillate O-demethylase oxygenase subunit |
|---|
| Protein accession | YP_001020004 |
|---|
| Protein GI | 124266000 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG AGCATCGCTG GTGGTATCCG GTCGCCACCG CTGCCGACCT GGGCGCCGGC
CCGCTGCCGG CGGCGCTGTT CGGTGAGGAC CTGGTGCTGT GGCGCGACGA AGCCGGCACG
CCGCACGCCT TCACGGATCG CTGCCCGCAC CGCGGCACGC GGCTCTCGCT CGGCGCGGTG
CGCGTCGTCG ACGGCCGGGC GCAGCTCGAG TGTCCGTACC ACGGCTGGCG CTTCGACGGC
GGCGGGCGCT GTCTGCGCAT CCCGGCGCTG CCCGACTTCA CGCCGGCGAC TGGCCATGCG
GCGCGGGCCC ATCCGCTGCG CGAGGCGCAT GGCCTGCTGT GGGTCGTGCT CGGCGGTGAT
GCCAACCTGG AGACCGTCGC CACGGCCTGC CTGCCCGACC CGGGGCCGGT ACCGGGCCGT
GCCGTCGTCT GCGGTCACTA CGACGTGGGC ACATCGGCGC CGCGGGTGGT GGAGAACTTC
CTCGACACCT CGCACTTCGC CTTCGTGCAT GAAGGCTGGC TCGGCGACCG CGACCACACC
GAAGTGCCGA TCTACGACGT GGTGCCCGAC GCCAACGGCG CGCCTGGCGT GCCGCACTAC
CGTGCGTGGC AGCCGCAGGC CAGCGCGCAG TCGGCCGGCG GCGCCTGGGT CGACTACCGC
TACCAGGTGC TGTCTCCCTG CAGCGCCTTG CTGGTCAAGC AGGCCGGCGA CGACGCGCAG
ACGACGCAGG AGGCCTATGC GTTATGGGTT GCGCCGCTGG AACCTGAGCG CAGCCGCGTG
TGGTTCACGC TGTTCACCTG CGATACCGCC ACGCCCGACG AGACGCTGCG CGCCTTCCAG
CACGGCATCT TCACGCAGGA CCAGCCGGTG CTCGAATCGC AGCGGCCGCG CCGGCTGCCG
CTGAGCGGCA GCGAGGCGCA CTGCGCGGCC GATCGCCTGA GCACCGCCTA CCGGCGCTAC
CTGCAGGCGC AGGGCCACAC CTACGGCACC TGCTGA
|
|---|
| Protein sequence | MNDEHRWWYP VATAADLGAG PLPAALFGED LVLWRDEAGT PHAFTDRCPH RGTRLSLGAV
RVVDGRAQLE CPYHGWRFDG GGRCLRIPAL PDFTPATGHA ARAHPLREAH GLLWVVLGGD
ANLETVATAC LPDPGPVPGR AVVCGHYDVG TSAPRVVENF LDTSHFAFVH EGWLGDRDHT
EVPIYDVVPD ANGAPGVPHY RAWQPQASAQ SAGGAWVDYR YQVLSPCSAL LVKQAGDDAQ
TTQEAYALWV APLEPERSRV WFTLFTCDTA TPDETLRAFQ HGIFTQDQPV LESQRPRRLP
LSGSEAHCAA DRLSTAYRRY LQAQGHTYGT C
|
|---|
| |