Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0680 |
Symbol | |
ID | 4784421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 715006 |
End bp | 715629 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640089240 |
Product | amino acid transporter LysE |
Protein accession | YP_001019877 |
Protein GI | 124265873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.199989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCACGC TGCAGTTCCT CGTCACCTCG CTCATCGTCG TGCTGATCCC CGGCACCGGG GTCGTGTTCA CCGTGTCCAC CGGGCTCGCG CAGGGCCGGC GCGCCAGCGT CTACGCGTCG CTGGGCTGCA CCGCGGGCAT CGTGCCGCAC CTGCTGGCCT CGATGCTGGG GTTGTCGGCG GTGATGCACA CCAGCGCGCT CGCGTTCCAG GCACTCAAGT TCGCCGGGGT CGCCTACCTG TTCTACCTGG CCTGGGCCAC CTGGCGCGAC CGCGGGGCGT TCGCCGTCGA CCGGGCCGCC GCCGCCGCAC CGCTGCCGAT GCGCAGCCTG GTCACGCGGG CTGCGCTGCT GAACACGCTG AACCCCAAGC TCACGATCTT CTTCCTGGCC TTCCTGCCGC AGTTCGTGGC CGTGGACGCC GCGTCGCCGC TGGCGCAGAT GCTGGTGCTC AGCGGCGTGT TCATGGCGAT GACCTTCGCG GTGTTCGTCG TCTACGGGCT GCTGGCCGAC GCCTTCCGCG GCGTGGTGCT CGAGTCGCCG CGGGTGCAGG ACTGGCTGCG CCGCGGCTTC GCCGGCTGCT TCGCCGGGCT GGGCGCGAAC CTCGCGCTGT CGGAGTCGCG TTGA
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Protein sequence | MITLQFLVTS LIVVLIPGTG VVFTVSTGLA QGRRASVYAS LGCTAGIVPH LLASMLGLSA VMHTSALAFQ ALKFAGVAYL FYLAWATWRD RGAFAVDRAA AAAPLPMRSL VTRAALLNTL NPKLTIFFLA FLPQFVAVDA ASPLAQMLVL SGVFMAMTFA VFVVYGLLAD AFRGVVLESP RVQDWLRRGF AGCFAGLGAN LALSESR
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