| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0338 |
|---|
| Symbol | |
|---|
| ID | 4786888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 370348 |
|---|
| End bp | 372069 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640088893 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001019535 |
|---|
| Protein GI | 124265531 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGC CCGTGATCCC GATCCAGGTC CTGCGCGACC CGGCCGTCAA ACCGCGTCGG
GCCTCGGGCG ACCGCCCGGT CGACGCCCAG GCATTGAGCA CGGTCCAGGC CCTGCTGGCG
GCCAGGCCTC AGACCCCGTT GCGGCGCGAC CTGCTGATCG AGCACCTGCA CACGCTGAAC
GATCATTTCG GTCAGCTGCG CACCGACCAT CTGGCTGCTC TGGCTCAGTT ACTGCGCCTT
TCCCAGGCCG AAGTTTATGA AGTGGCGAGC TTTTATCACC ACTTCGAAGT GGTCCAGGCG
AAGGCCGACG GCAGCTATCC GGAGCCCGCG CCGCTGACCG TCCGCGTCTG CGACGGCATC
GCCTGCGAGC TGACCGGCGC CCGGGATCTG CTGACCCGCC TGCCCGCATT GCTGGGGACC
GAGGTGCGCG TGATCGCCGC CCCGTGCATC GGCCGCTGCG AGCAGGCCCC GGCGGCCGTC
GTGCACCAGT GCCCGGTGCC GAACGCGACA CCCGAAGCCG TGCAGGCTGC AGTGACCGCC
GGCCGCACGA AGCACGAACC CGCGCCTTAC ACCACGCTCC CGTCCTATCA CGACGCCGGC
GGCTACCGCA CGCTGCGGCA GTGCCTGAGC GGCGAACGGC CGCTGGAGAC GGTGCTGTCG
ACGATGGAAG CTTCGGGTCT GCGCGGGCTC GGGGGGGCCG GCTTCCCGGC CGGGCGCAAG
TGGCGCATCG TGCGCGAGCA GGCGGCGCCG CGCCTGATGG CGGTGAACAT CGACGAAGGC
GAGCCGGGCA CCTTCAAGGA CCGCCATTAC CTCGAGCGCG ATCCGCACCG CTTCCTCGAG
GGCCTGCTGA TCGCGGCCTG GGCGGTCGGC GTCGACGCCG TCTACATCTA CCTGCGCGAC
GAGTACCACG GCTGCCGCAC CCTGCTCGAG CGCGAGCTGG CGGCGCTGCG AGCCGACCCG
CCGATGCGCG ACATGCCGGC GATCGAGCTG CGCCGCGGCG CCGGCGCCTA CATCTGCGGC
GAGGAGTCCG CGATGATCGA GTCGATCGAA GGCAAGCGCG GCATGCCGCG CCTGAGACCG
CCCTACGTGG CGCAGGTCGG CCTGTTCGGG CGCCCGACGC TGGAGCACAA CTTCGAGACG
CTGTACTGGG TGCGCGACAT CCTCGAGAAG GGTGGCGACT GGTTCGCCGG CCACGGCCGC
CACGAGCGCA AGGGGCTGCG CTCGTTCTCG GTGAGCGGCC GCGTGAAGAA GCCGGGCGTG
CACCTCGCGC CGGCCGGCAT CACGCTGCGC GAGCTGGTCG ACGAGTACTG TGGCGGCATG
CTGGACGGCC ACCAGCTGCA CGCCTACCTG CCGGGCGGCG CCTCGGGCGG CATCCTGCCC
GAGCGCCTGG CCGACGTGCC GCTGGACTTC GACACGCTGC AGCCGCACGG CTGCTTCATC
GGCTCGGCGG CGGTGGTGGT GTTGTCTGAC CAGGACCGCG TGACGGACGT GGCGCGCAAC
CTGATGCGCT TCTTCGAGCA CGAGAGCTGC GGGCAGTGCA CGCCGTGCCG TTCGGGCACC
GCCAAGGTCA ACGAACTGAT CGCCAGCGAC CGCTGGGACC TGCCGCTGCT CGCCGAGCTG
TCGCAGGTGA TGCGCGATGC GTCCATCTGC GGCCTGGGCC AGGCGGCGCC GAACCCGGTG
GACTGCGTGA TCAAGTATTT TCCGGAAGAG CTGACGGCAT GA
|
|---|
| Protein sequence | MNAPVIPIQV LRDPAVKPRR ASGDRPVDAQ ALSTVQALLA ARPQTPLRRD LLIEHLHTLN
DHFGQLRTDH LAALAQLLRL SQAEVYEVAS FYHHFEVVQA KADGSYPEPA PLTVRVCDGI
ACELTGARDL LTRLPALLGT EVRVIAAPCI GRCEQAPAAV VHQCPVPNAT PEAVQAAVTA
GRTKHEPAPY TTLPSYHDAG GYRTLRQCLS GERPLETVLS TMEASGLRGL GGAGFPAGRK
WRIVREQAAP RLMAVNIDEG EPGTFKDRHY LERDPHRFLE GLLIAAWAVG VDAVYIYLRD
EYHGCRTLLE RELAALRADP PMRDMPAIEL RRGAGAYICG EESAMIESIE GKRGMPRLRP
PYVAQVGLFG RPTLEHNFET LYWVRDILEK GGDWFAGHGR HERKGLRSFS VSGRVKKPGV
HLAPAGITLR ELVDEYCGGM LDGHQLHAYL PGGASGGILP ERLADVPLDF DTLQPHGCFI
GSAAVVVLSD QDRVTDVARN LMRFFEHESC GQCTPCRSGT AKVNELIASD RWDLPLLAEL
SQVMRDASIC GLGQAAPNPV DCVIKYFPEE LTA
|
|---|
| |