| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0131 |
|---|
| Symbol | |
|---|
| ID | 4784831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 135211 |
|---|
| End bp | 136068 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640088678 |
|---|
| Product | glutamine transport system substrate-binding protein |
|---|
| Protein accession | YP_001019328 |
|---|
| Protein GI | 124265324 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.210199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0525108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA CGACCCGCCA GTTTCTGAAG ACCGCCGGCC TGTTCGGTGC CGGCCTGCTG
CTCGCCGCCT GCGGCAAGAA GGAAGAGCCG GCGCCCGCCG CCGCCCCCGC TTCCGCGCCC
GCGCCGGTGG CTTCCGCTCC GGCGCCCGCG CCCGCCAAGG TCTACGTCGT CGGCACCGAT
GCCGCCTACG CCCCGTTCGA GTTCCAGAAC GAGAAGGGCG AGATCGTCGG CTTCAGCATC
GACCTGCTCC AGGCCGTGGC CGCCAAGGGC GGCTTCGAGG TGAAGTTCGT CAACACGCCG
TGGGAAGGCA TCTTCAACGC GCTGCAGCAG GGTGACCGCG ACCTGCTGAT CTCGTCGATC
ACCATCACCG ACGAGCGCAA GCAGACGATG GACTTCTCCA ACCCCTACTT CGACGCCTTC
CAGCTGATCG CGGTGAAGGC CACCTCCAAG GTCGCGAAGT TCGACGACCT GAAGAAGCTC
AAGGTCGGCG TGCAGACCGG CACCACCGGC GACGAGGTCG TGACCAAGCT GCAGGGCAAG
AACAGCGCCA ACGTCAAGCG CTTCGAGTCG ACGCCGCTGG CGTTGAAGGA GCTCGAGGCG
GGCGGTGTCG ATGCCGTCGT GGCCGACAAC GGCGTGATCA TCAACTACGT CACCAACAAC
GCGGGCGCCA ACTTCAAGAC CGTCAGCGAC AGCGCCTTCG CGCCCGAGCA GTACGGCATC
GCCGTCAAGA AGGGCAACGC CGAACTGCTG GAGAAGGTGA ACAAGGGCAT CGCGGCCATC
AAGGCCGACG GCAGCTACGA CCAGGTCTAC GCCAAGACCT TCGGTGCAGC CGCTCCCGCG
GCGGCGGCTT CCAAGTAA
|
|---|
| Protein sequence | MKLTTRQFLK TAGLFGAGLL LAACGKKEEP APAAAPASAP APVASAPAPA PAKVYVVGTD
AAYAPFEFQN EKGEIVGFSI DLLQAVAAKG GFEVKFVNTP WEGIFNALQQ GDRDLLISSI
TITDERKQTM DFSNPYFDAF QLIAVKATSK VAKFDDLKKL KVGVQTGTTG DEVVTKLQGK
NSANVKRFES TPLALKELEA GGVDAVVADN GVIINYVTNN AGANFKTVSD SAFAPEQYGI
AVKKGNAELL EKVNKGIAAI KADGSYDQVY AKTFGAAAPA AAASK
|
|---|
| |