| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0063 |
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| Symbol | rfaL |
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| ID | 4783820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 58085 |
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| End bp | 59680 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640088610 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001019260 |
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| Protein GI | 124265256 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0639643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGCTT CATCATGCGG TTCGGCACCG CCGTTGAACG GGGAGCATCA AGCAGCACGA
TGGGCCGCAA CTCTGGCGTT CGTTGTTTGC ATCGTGTATT CCCTAGCGAG ATTTGATGAC
GGTCAGGGCG GACCGTCGCT GGTGTTACTC GCAGCAAGCG TAGCGCTGTT GGTCGCAAGC
GGCAACGCCG GCCCGTGCAG TGCGCCGGCG ATGGCCTGGG CCTGGTGGAT CGCTGGAATG
GCCTGCGTGG CCGTGGCACT GGTGCAGTAC TTTGCCCCGT CGCTGGCCAA TGGCTGGCTG
GTCGCCAACC CCGGTGCTGC CGGTCGCGCC GTCGGCAACA TGCGCCAACC CAACCATCTG
GCCACCGCCC TGTTGTGCGC GATGGTCATG ACTGCGTGGC TTTGGCAGGC GGGTCGCCTG
CGCGCGCCCT GGGCCGTCGC CTCGCTCTTC GCCATGGTGC TGGCGGTGGC GCTTAGCGCC
TCGCGGACCG GCGCGCTTTC GGTCGGCGTG CTGCTGCTGT GGGCCGCGGT CGATCGCACA
CTGCCGCGCG CCGCCCGATG GACGCTCGCG CTGACGCCCG TGGTCTATCT CTTCTGCTGG
GCCGGCCTGG CGGAGTACGC CGAGTGGCAG CAGGCCCATT TCTACGGCGC CGAACGACTG
CAGTCACACA GCGACATCAG CAGCTCCCGC TTCGCGATCT GGCGCAATGC GTTGACGCTG
ATCGCACAGA ACCCGTGGAC CGGCGTCGGC TGGGGCAACT TCAACTTCGC GTGGACCTTC
ACGCCCTTCC CGGACCGGCC GGTCGCGTTC TTCGACCACA CGCACAACCT GCCGCTGCAG
CTCGCGGTCG AGATCGGCCT GCCGGCCACG GCCTTGGTGC TGGGACTGTT CGGATGGGCC
CTGTGGCGCG CACGCGGCGC GTGGCGGGTG GCGGGCGAAC AGCCGGGCCA TCCGGCGCGC
GCGGCTTTCG TGATGCTGGT GGTGCTGGGG GTGCACAGCC TGCTCGAGTA CCCGCTGTGG
TATGCCTACT TCCTGCTGCC GGCAGCCTGG GCGCTGGGTG TGTTTCTCGG GTCGGCGCCG
ACGAAGGAGC CTGCCTCCGA TCTGAATGAG CCGGCGAGTC CGGCGGTCGC CATCATGGCG
CGGTGGTCGA CGTTCCTTCT GCGTGCGGCC GGTGCACTGA TGATCGTCGG CGCCGCGTAT
GCCGCCTGGG ATCACCGCCG CGTCGAGGTG ATCTTCGCGC CGCCGGCCGG CGCCGGCCCG
TTGGCGGAAC GCATCGCCGC CGGACGCGAG AGCGTGCTGT TCGGCTATCA CGCCGACTAC
GCCGCCGTGA CCAACGAGCC GAAGGATCAG GCGCTTGCAA GCTTTCGCCG TCCGCTGCAC
CACCTGGTCG ATGTGCGTCT GCTCATCGCG TACGTCGAGG CGCTGAAGGC CAATGGTCGC
GATGCCGAGG CGCTGTACGC AGCCCAGCGA TTGCGAGAAT TTCGGCGCGA AGACGCGCAG
GCCTACTTCA AGAATTGCAC GGCCGACAAC CCGGTGCCGC CCTTCCAGTG CCGAACCGAT
CCGGTAGCGC TGACCTGGCG CGACCTGGAG CCTTGA
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| Protein sequence | MIASSCGSAP PLNGEHQAAR WAATLAFVVC IVYSLARFDD GQGGPSLVLL AASVALLVAS
GNAGPCSAPA MAWAWWIAGM ACVAVALVQY FAPSLANGWL VANPGAAGRA VGNMRQPNHL
ATALLCAMVM TAWLWQAGRL RAPWAVASLF AMVLAVALSA SRTGALSVGV LLLWAAVDRT
LPRAARWTLA LTPVVYLFCW AGLAEYAEWQ QAHFYGAERL QSHSDISSSR FAIWRNALTL
IAQNPWTGVG WGNFNFAWTF TPFPDRPVAF FDHTHNLPLQ LAVEIGLPAT ALVLGLFGWA
LWRARGAWRV AGEQPGHPAR AAFVMLVVLG VHSLLEYPLW YAYFLLPAAW ALGVFLGSAP
TKEPASDLNE PASPAVAIMA RWSTFLLRAA GALMIVGAAY AAWDHRRVEV IFAPPAGAGP
LAERIAAGRE SVLFGYHADY AAVTNEPKDQ ALASFRRPLH HLVDVRLLIA YVEALKANGR
DAEALYAAQR LREFRREDAQ AYFKNCTADN PVPPFQCRTD PVALTWRDLE P
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