Gene P9303_27831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_27831 
SymbolrnhA 
ID4777250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2448713 
End bp2449486 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID640088306 
Productribonuclease HI 
Protein accessionYP_001018778 
Protein GI124024471 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG GTCGTGGACG GGTTGTTGCT GCTGCCACTG ATGGGGCTTG TAGTGGAAAT 
CCTGGCCCTG GGGGCTGGGG GGCACTGCTG CGCTTTGAGG ATGGGAGCGT GGAGGAGTTC
GGAGGCCATG CGCCGGCCAC GACCAACAAC CGCATGGAAC TTCAGGCGGC CCTTCATGTG
CTGGAGCAGC TCAAAGAGCT TCCTTGTCAC CCCGATTTAA AGATCCGTAC CGACAGCAAA
TATTTAATTG ATGGTTTAAG CAAATGGATG GCGGGATGGA AACGTAAGGG TTGGCGTACG
GCGGCTGGCA AGCCTGTGCT GAATCAGGAT CTCTGGCGAG CTCTAGACCG TGCGCGCTTG
GATGATGTGC CCCTGGCTTA TGTGAAAGGT CACAGCGGTG ACCCAGACAA TGAAAGGGTT
GACCAAATCG CAGTGAGCTT TTCCAAAGGA GGTGGTGCTG CAGCGTTGAT GTCTGGACAG
GGGTCAGCCT CTATTGCACT CGGTCTTGTT GAGCCGATCA AAGAAGCTGG AGATGGCGAA
GATGATGCCC CTTCTGATTT GCAGCGGCTG CTCACAAGAC TGGAGCTGGC TGATCGTTTC
GCTGTGCGTG GCTATGGCCT CAGCCTGGTT GAGTTGGCCC AGTTGGTGGA GCAACCAATC
GAGCAGCTTG CGAGTAAAAC TGCCCCCTGG CGTTGGCGCG ATTGGCTATT GGAGCCTATG
GGGGAAAACC GCTGGCGGTT GCGCCGCTGC GCGGCAGGAT CGGATCAGAT CTGA
 
Protein sequence
MADGRGRVVA AATDGACSGN PGPGGWGALL RFEDGSVEEF GGHAPATTNN RMELQAALHV 
LEQLKELPCH PDLKIRTDSK YLIDGLSKWM AGWKRKGWRT AAGKPVLNQD LWRALDRARL
DDVPLAYVKG HSGDPDNERV DQIAVSFSKG GGAAALMSGQ GSASIALGLV EPIKEAGDGE
DDAPSDLQRL LTRLELADRF AVRGYGLSLV ELAQLVEQPI EQLASKTAPW RWRDWLLEPM
GENRWRLRRC AAGSDQI