| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_27541 |
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| Symbol | trmE |
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| ID | 4777008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 2425258 |
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| End bp | 2426655 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640088277 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001018749 |
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| Protein GI | 124024442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCTT CTCCAATCCC CCATCAACAA ACGATTGCCG CAGTGGCAAC GGCGGTTGCA
CCAGGGCAAG GGGGTATTGC TGTGGTGCGG CTTTCTGGGC CAGCGGCTGA GGTCGTTGGG
CGGAGTGTGG TGTCGATCCC GGGGCAACAA CTTTGGGTTA GTCATCGTGT GTTGTATGGC
CATGTGATGG ATGAGAGCGG CAAGGAACGG ATCGATGAAG TTCTTGTGTT GCTGATGAAG
GGGCCACGCA GTTTCACTGG CGAGGATGTT GTGGAGATCC ACTGTCATGG TGGATTGATG
GCTGTTCAGC GGGTGCTTGA GCGTGTGTTG GCTCAGCCGC ATGTGCGCCG GGCATTGCCT
GGAGAGTTCA GCCAGCGGGC GGTGCTCAAC GGCCGGCTTG ACCTCACCCA GGCGGAGGCG
ATCAGTGAAC TTGTGGCGGC GCGTAGTCGT CGAGCAGCCC AGTTGGCGAT GACGGGAGTC
GATGGAGGCA TTCAGCGCCG CATCACCTCC CTGCGGGAAA GGTTGTTGGA TCAGCTCAGT
GAGCTGGAGG CCAGGGTTGA TTTTGAGGAG GATCTTCCCC CTCTCGATGC TGCTGAGTTG
TTACTTGAGT TGCAGTGCGT GCGGCGAGAG CTCGAACAGC TTGTTGAAGA TGCCAAGCGT
GGTGATGTGC TGCGTCAGGG GCTACAGGTG GCTCTGGTTG GTCGCCCTAA TGTTGGTAAG
AGCTCCCTGT TGAATCGCCT CAGCCGCCGG GAGCGGGCGA TCGTGACGGA TCTTCCTGGT
ACGACCAGGG ATGTCTTGGA GAGCGAGATT GTGCTGGAGG GTGTGCCGAT CACCTTGGTT
GACACCGCAG GTATTCGCGC CACCAAAGAT GCGTTGGAGC AACTTGGGAT AGACCGTAGT
CATCAGGCTC TCGCTGCAGC TGATGTGGCG GTGTTGGTGT TTGATCTGAG TTTGGGATGG
ACAGCCGACG ATGCGGCGTT GCTCGCTCAG ATCCCAGATG ATCTGCCAAG GCTTCTTGTG
GGTAATAAAG CTGATCTTCA GCCTGCCTCG ATGACTGCTT CGCTTAGCAA TGAGGTCGAT
GGCAAGACTG TGGATGTGAT GTTGAGTGCA CTCACTGGGC AAGGAGAAGA GGCCTTGATT
GAGGCTGTTT TGAAGACTTG TGGGGCCAGC GAAGCGCAGG GGTTGGTGGT TGCTCTCAAT
CAACGGCAGC AAGATCTTGC CGCAACAGCA GCAATTGCCT TGGCTCGCAC GCAGGAAGCT
GCAGCGCAGA AGTTGCCCTG GGATTTCTGG ACCATTGATC TGCGGCAAGC GATCAGCAGC
TTGGGTGAGA TCACTGGCGA GGAGATCACA GAAGCTGTGC TTGATCGAAT CTTTTCGCGG
TTTTGTATTG GCAAATAA
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| Protein sequence | MMSSPIPHQQ TIAAVATAVA PGQGGIAVVR LSGPAAEVVG RSVVSIPGQQ LWVSHRVLYG
HVMDESGKER IDEVLVLLMK GPRSFTGEDV VEIHCHGGLM AVQRVLERVL AQPHVRRALP
GEFSQRAVLN GRLDLTQAEA ISELVAARSR RAAQLAMTGV DGGIQRRITS LRERLLDQLS
ELEARVDFEE DLPPLDAAEL LLELQCVRRE LEQLVEDAKR GDVLRQGLQV ALVGRPNVGK
SSLLNRLSRR ERAIVTDLPG TTRDVLESEI VLEGVPITLV DTAGIRATKD ALEQLGIDRS
HQALAAADVA VLVFDLSLGW TADDAALLAQ IPDDLPRLLV GNKADLQPAS MTASLSNEVD
GKTVDVMLSA LTGQGEEALI EAVLKTCGAS EAQGLVVALN QRQQDLAATA AIALARTQEA
AAQKLPWDFW TIDLRQAISS LGEITGEEIT EAVLDRIFSR FCIGK
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