| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_24551 |
|---|
| Symbol | rph |
|---|
| ID | 4777127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 2156894 |
|---|
| End bp | 2157628 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640087975 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001018451 |
|---|
| Protein GI | 124024144 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACAC CCCCCCAGCC ACGTGCTGAC GGCCGCCTTG CTGACGTGAT GCGGCCCCTT
CAGGTCACAT GGGATCCAAT GGGCTTTGCC CTCAGTTCCT TAATCATCCG CACTGGTCGC
ACCGCAGTGC TCTGCAGTGT TTGCGTTGAA GAAGGTGTAC CCCGCTGGCG CCAAGGCCAA
GGCAAAGGCT GGCTCAGCGC CGAGTACCGC CTTCTGCCTG GGTCTACACC GCAAAGACAG
AACCGTGAAC TGCTCAAGCT TTCCGGACGC ACTCAAGAAA TTCAACGCCT CATTGGCCGC
AGCCTGCGCG CCGTGATCGA CATGGCTGCT CTTAGGGAAA CCACCCTGAG AATTGATTGT
GACGTTATTC AGGCTGATGC CGGCACACGT ACAGCCGCCA TCACCGGCGC TTGGATCGCC
TTAAAACGAG GCTGCGATCG CTTGCTGGAA CAAGGCCTGC TCACGCATCA ACCCGTCATC
GACCAAGTTG CTGCAGTATC CGTTGGTTTA GTCGATAGTT ATCCCCTTCT TGACCTCGAC
TACAGCGAAG ACTCCAGGGC TGATGTGGAT CTAAACGTGG TAATGGGCTC CAATGGGCAC
CTATTGGAAC TGCAGGGCAC CGCTGAAGGG GCTCCATTCA GCAGGAATCA ACTCAACGAC
TTGCTGAATC TGGCAGAACC CGGCCTACAA CATCTACAAA CCTTCCAACG TTCGGCATTA
ATGCAAGAAG ACTAA
|
|---|
| Protein sequence | MLTPPQPRAD GRLADVMRPL QVTWDPMGFA LSSLIIRTGR TAVLCSVCVE EGVPRWRQGQ
GKGWLSAEYR LLPGSTPQRQ NRELLKLSGR TQEIQRLIGR SLRAVIDMAA LRETTLRIDC
DVIQADAGTR TAAITGAWIA LKRGCDRLLE QGLLTHQPVI DQVAAVSVGL VDSYPLLDLD
YSEDSRADVD LNVVMGSNGH LLELQGTAEG APFSRNQLND LLNLAEPGLQ HLQTFQRSAL
MQED
|
|---|
| |