Gene P9303_24191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_24191 
Symbol 
ID4779005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2129779 
End bp2131416 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content45% 
IMG OID640087940 
Producthypothetical protein 
Protein accessionYP_001018417 
Protein GI124024110 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC TGCAGTCAGC AGTGCAGGCA TATCAGGGTA GAGATCTTGA CGGTGCTGAG 
GCAATTTTCA AGCAGATTCT CGCTGTAAAT CCAAAGGAGC CAACTGCGCT GCATCTCCTC
GGTTGTATTT ACAAAGATCG TGGACAACTC CAGCAGGCTG TTGAGTTAAT CCAGGCATCT
ATTCGAGAAG ATGAGAGTAA TCCAATTCCA TTCTTTAATC TTGGCAAGAT CCTTGCTATC
GCTGGTCAGC ATGAGAATGC AGTGGGCGTC TTCCAGGAGT CATTGAAGAG AAACCAGCAG
ATCCCTGAAA CGTGGTTTTG CTTTGCCAAT GCTCTGAGGG AGATTGGGAA AACAGAGGAA
GCAAAGCGGG CATATCGAAA TGCACTGCAA TTAAATCCTG CACATGCTGG AGCAGCAGGA
AATTTAGGAG CACTGCTCAC CGATGATGGT GAGTTGGATG AGGCTGAAAA GGTATTGAGA
AGGGCATTAG CGAGTAATCC TGAGGATATA AATTGCCTTG TAAATCTAGG CATTTTATTG
AAGGAAGAGG GAGAGTTTGA AGAAGCGATC GCAAGTTATC GGAAGGCGAT TGAGGTGAAG
CCTGATTTTG TAGATGCGTA TTTGAATCTG GGGGGTGTGT TGAAAGATGT TGGGAGGATG
GATGAGGTGA GGCAAATTGT TGCGGCTCTT CGCCAGATGA AGTCTCTAGA GGATGAGACT
TTGGTCGCTA TTCAAGATAA GACGTTAGTT TTTGATTGGC ATCATAGAAG AGCTTTAAGT
CTTTTCTGTG AAGTTGAGCT TGCTGCTGCC TTTTCTGGAA TGGAATCCTC CTCTCATTTT
GATGCTGTAA AGCAAGTTGA TGCTCTCTGC TTTCCTGCTT CATTCCTAGG AGAGCAGATT
GCTTGTGAAG AGGGCAAGCT GTTGTATGAA AAGGGGTATT TGGTTGACGA AGGTCTGGTT
TCCGCAGACT TATGTGCTCA GCTCATAAGT CAATTCAATA ATCGGAATGA GCGGATGAGT
GCTGCGCTTA TTGAAACGGT TTTGGCTGAT GGTGTGTTGC GATCTGTTTT GGAGAGAATA
TCTTTGCACA CGGGTTTCCC GCATTTGATT TGGAATTGTA TATATTTCAC CAAGGGTCCC
GATGATGAGG CAGTGTCTGA TGCTTGGCAT TACGACAATC ATTACAATGT TTGGACTCCA
AAGCTCATGA TTTACCTTAA TTCTCAGCGA GAAGAGGGTG GAGCTACGCA TTTTGTTGAC
GCAGCTCTCT CGCGGCAAAT ATCCGAGAAA TCAGATTATA TGGGTCTTGT CTTTCAGCGT
GAATCTTATT CGGACCGAGT TAAAGGATTG GTTGAAGAGC TAAATATTGA TCCTGTCACG
CTTGATCCTG AGCATTATGT CTTTTCTCCC GAGAGGGCAG GGTCGGGTGT CTGGTTTTGT
CCCGCCAGAT CATTGCATCG AGGCGTCAGC CCTAAGAAAG GTGTTAGGCA AGTGCTTTCT
TTTTCATTGA CTCCTTTACC CCGTGATTGC GGCTGGTCTG TTGATCAGTG TGTTGAGAAA
TCAATTGAAA TTCTGAAGGA TAAAATTGAA AAGGGTAGGC AAAAAGATGA TGTCAATCCC
TATTGGACTG CTGCCTAG
 
Protein sequence
MQQLQSAVQA YQGRDLDGAE AIFKQILAVN PKEPTALHLL GCIYKDRGQL QQAVELIQAS 
IREDESNPIP FFNLGKILAI AGQHENAVGV FQESLKRNQQ IPETWFCFAN ALREIGKTEE
AKRAYRNALQ LNPAHAGAAG NLGALLTDDG ELDEAEKVLR RALASNPEDI NCLVNLGILL
KEEGEFEEAI ASYRKAIEVK PDFVDAYLNL GGVLKDVGRM DEVRQIVAAL RQMKSLEDET
LVAIQDKTLV FDWHHRRALS LFCEVELAAA FSGMESSSHF DAVKQVDALC FPASFLGEQI
ACEEGKLLYE KGYLVDEGLV SADLCAQLIS QFNNRNERMS AALIETVLAD GVLRSVLERI
SLHTGFPHLI WNCIYFTKGP DDEAVSDAWH YDNHYNVWTP KLMIYLNSQR EEGGATHFVD
AALSRQISEK SDYMGLVFQR ESYSDRVKGL VEELNIDPVT LDPEHYVFSP ERAGSGVWFC
PARSLHRGVS PKKGVRQVLS FSLTPLPRDC GWSVDQCVEK SIEILKDKIE KGRQKDDVNP
YWTAA