Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_24191 |
Symbol | |
ID | 4779005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 2129779 |
End bp | 2131416 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640087940 |
Product | hypothetical protein |
Protein accession | YP_001018417 |
Protein GI | 124024110 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGC TGCAGTCAGC AGTGCAGGCA TATCAGGGTA GAGATCTTGA CGGTGCTGAG GCAATTTTCA AGCAGATTCT CGCTGTAAAT CCAAAGGAGC CAACTGCGCT GCATCTCCTC GGTTGTATTT ACAAAGATCG TGGACAACTC CAGCAGGCTG TTGAGTTAAT CCAGGCATCT ATTCGAGAAG ATGAGAGTAA TCCAATTCCA TTCTTTAATC TTGGCAAGAT CCTTGCTATC GCTGGTCAGC ATGAGAATGC AGTGGGCGTC TTCCAGGAGT CATTGAAGAG AAACCAGCAG ATCCCTGAAA CGTGGTTTTG CTTTGCCAAT GCTCTGAGGG AGATTGGGAA AACAGAGGAA GCAAAGCGGG CATATCGAAA TGCACTGCAA TTAAATCCTG CACATGCTGG AGCAGCAGGA AATTTAGGAG CACTGCTCAC CGATGATGGT GAGTTGGATG AGGCTGAAAA GGTATTGAGA AGGGCATTAG CGAGTAATCC TGAGGATATA AATTGCCTTG TAAATCTAGG CATTTTATTG AAGGAAGAGG GAGAGTTTGA AGAAGCGATC GCAAGTTATC GGAAGGCGAT TGAGGTGAAG CCTGATTTTG TAGATGCGTA TTTGAATCTG GGGGGTGTGT TGAAAGATGT TGGGAGGATG GATGAGGTGA GGCAAATTGT TGCGGCTCTT CGCCAGATGA AGTCTCTAGA GGATGAGACT TTGGTCGCTA TTCAAGATAA GACGTTAGTT TTTGATTGGC ATCATAGAAG AGCTTTAAGT CTTTTCTGTG AAGTTGAGCT TGCTGCTGCC TTTTCTGGAA TGGAATCCTC CTCTCATTTT GATGCTGTAA AGCAAGTTGA TGCTCTCTGC TTTCCTGCTT CATTCCTAGG AGAGCAGATT GCTTGTGAAG AGGGCAAGCT GTTGTATGAA AAGGGGTATT TGGTTGACGA AGGTCTGGTT TCCGCAGACT TATGTGCTCA GCTCATAAGT CAATTCAATA ATCGGAATGA GCGGATGAGT GCTGCGCTTA TTGAAACGGT TTTGGCTGAT GGTGTGTTGC GATCTGTTTT GGAGAGAATA TCTTTGCACA CGGGTTTCCC GCATTTGATT TGGAATTGTA TATATTTCAC CAAGGGTCCC GATGATGAGG CAGTGTCTGA TGCTTGGCAT TACGACAATC ATTACAATGT TTGGACTCCA AAGCTCATGA TTTACCTTAA TTCTCAGCGA GAAGAGGGTG GAGCTACGCA TTTTGTTGAC GCAGCTCTCT CGCGGCAAAT ATCCGAGAAA TCAGATTATA TGGGTCTTGT CTTTCAGCGT GAATCTTATT CGGACCGAGT TAAAGGATTG GTTGAAGAGC TAAATATTGA TCCTGTCACG CTTGATCCTG AGCATTATGT CTTTTCTCCC GAGAGGGCAG GGTCGGGTGT CTGGTTTTGT CCCGCCAGAT CATTGCATCG AGGCGTCAGC CCTAAGAAAG GTGTTAGGCA AGTGCTTTCT TTTTCATTGA CTCCTTTACC CCGTGATTGC GGCTGGTCTG TTGATCAGTG TGTTGAGAAA TCAATTGAAA TTCTGAAGGA TAAAATTGAA AAGGGTAGGC AAAAAGATGA TGTCAATCCC TATTGGACTG CTGCCTAG
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Protein sequence | MQQLQSAVQA YQGRDLDGAE AIFKQILAVN PKEPTALHLL GCIYKDRGQL QQAVELIQAS IREDESNPIP FFNLGKILAI AGQHENAVGV FQESLKRNQQ IPETWFCFAN ALREIGKTEE AKRAYRNALQ LNPAHAGAAG NLGALLTDDG ELDEAEKVLR RALASNPEDI NCLVNLGILL KEEGEFEEAI ASYRKAIEVK PDFVDAYLNL GGVLKDVGRM DEVRQIVAAL RQMKSLEDET LVAIQDKTLV FDWHHRRALS LFCEVELAAA FSGMESSSHF DAVKQVDALC FPASFLGEQI ACEEGKLLYE KGYLVDEGLV SADLCAQLIS QFNNRNERMS AALIETVLAD GVLRSVLERI SLHTGFPHLI WNCIYFTKGP DDEAVSDAWH YDNHYNVWTP KLMIYLNSQR EEGGATHFVD AALSRQISEK SDYMGLVFQR ESYSDRVKGL VEELNIDPVT LDPEHYVFSP ERAGSGVWFC PARSLHRGVS PKKGVRQVLS FSLTPLPRDC GWSVDQCVEK SIEILKDKIE KGRQKDDVNP YWTAA
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