Gene P9303_23321 details

Gene Information

• Locus tag: P9303_23321
• Symbol: prfA
• ID: 4778635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2049795
• End bp: 2050898
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640087852
• Product: peptide chain release factor 1
• Protein accession: YP_001018332
• Protein GI: 124024025
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGTATGG ACTCTTCAAC CCTCATCACT CGGCTGGAAA CAGCCAAGAC CAGTTTTCAA 
AGTCTGGAGC GCCAGCTAGC TGATCCCGAT GTGGCAGCTG ATCCCAAACT TCTTGAAAGT 
ATTGCGCGAG AAAGAGCACG ACTGGAACCC CTCGTACTCG ATTTTGAAGC GCTCCAGCAT 
GTTGAGCAGG AATGGCAAGA GACCAAGCAG CTACTACGAG AAAGTAGGGG TGATGAAGCC 
ATGGAGTCTT TAGCCCAGGA AGAGTTGCAA CAACTAGAGG CACGCAAAAC AGTCTTGGTG 
AGACGCCTCA CCCTGGCCCT ACTCCCAAGT GATCCACGTG ATCAACGCAG CGTCATGCTG 
GAGATCCGCG CCGGTGCAGG CGGAAACGAA GCCTGCCTAT GGGCAGGTGA TTTAGCCCGC 
ATGTATGAGC GCTACGGTCA ACGCATTGGC TGGTCAGTCC AACCGTTGAG TGCAACAGAG 
GCCGATTTGG GGGGATTCCG TGAGCTAATC CTCTCAATCA AAGGCGATGC CGTCTTCAGC 
CAACTGAAAT TCGAAGCCGG CGTGCATCGA GTTCAACGGG TTCCTACTAC AGAATCCCAA 
GGTCGTGTAC ACACCTCCAC CGCAACAGTG GCCGTGATGC CAGAAGCTGA TGCAGTGGAA 
GTGCAGATCG ATCCCAGCGA ACTAGAAATC AGCACTGCTC GCTCAGGCGG GGCTGGCGGA 
CAAAATGTCA ACAAGGTTGA AACGGCAGTG GACCTTCTCC ACAAGCCCAC CGGTATCAGG 
GTGTTCTGCA CCCAGCAACG CTCCCAACTG CAGAACCGAG AACGTGCCAT GGAAATCCTG 
AGAGCGAAGT TACTGGAAAG ACAAATTGCA GAAGCCAACG CGCGTGAAAG CTCAACGAGA 
AGAGCCCAAG TGGGAACTGG CGACCGCAGC GAAAAGATCC GCACCTACAA CTACAAAGAC 
AATCGCACCA CTGACCACCG ATTAGGACGC AATTTCTCCC TCGAGCCAGT GCTGACTGGC 
CAGCTGGAAG AGCTGATCGG CGCCTGCATT GCCGAAGAGC AACGCCATCA ACTCGAAGAA 
CTCAGTCATC AGGAGGAAGG CTGA 

 

Protein sequence

MGMDSSTLIT RLETAKTSFQ SLERQLADPD VAADPKLLES IARERARLEP LVLDFEALQH 
VEQEWQETKQ LLRESRGDEA MESLAQEELQ QLEARKTVLV RRLTLALLPS DPRDQRSVML 
EIRAGAGGNE ACLWAGDLAR MYERYGQRIG WSVQPLSATE ADLGGFRELI LSIKGDAVFS 
QLKFEAGVHR VQRVPTTESQ GRVHTSTATV AVMPEADAVE VQIDPSELEI STARSGGAGG 
QNVNKVETAV DLLHKPTGIR VFCTQQRSQL QNRERAMEIL RAKLLERQIA EANARESSTR 
RAQVGTGDRS EKIRTYNYKD NRTTDHRLGR NFSLEPVLTG QLEELIGACI AEEQRHQLEE 
LSHQEEG