| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_23081 |
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| Symbol | rpsC |
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| ID | 4776478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 2037352 |
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| End bp | 2038080 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640087828 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001018308 |
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| Protein GI | 124024001 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAACA AAATCCATCC AACCGGATTA CGCCTGGGGA TCACCCAGGA GCACCGATCT
CGTTGGTACG CCACCAGCAA GATGTACCCA ATCCTCCTTC AGGAGGACGA CAGGATCCGT
CGATTCATCC ATAAGAAGTA CGGCGCAGCA GGCATCAGCG ATGTGTTGAT TGCCCGCAAG
GCCGACCAAC TCGAAGTGGA GCTGAAGACT GCACGACCAG GTGTGCTCGT TGGCCGCCAG
GGCAGTGGCA TCGAAGAGCT GCGAACCGGC ATCCAAAAAA CCATCGGTGA TCACAGCCGA
CAGGTTCGGA TCAACGTCGT CGAAGTCGAG CGAGTCGATG CCGATGCCTT CCTGCTTGCC
GAGTACATCG CCCAGCAGCT CGAGAAGCGA GTCGCCTTCC GCCGCACCAT CCGCATGGCC
GTACAACGGG CCCAGCGAGC GGGTGTATTG GGCTTAAAAA TCCAGGTTGG TGGTCGGCTC
AACGGCGCCG AAATCGCTCG CAACGAATGG ACCCGCGAAG GTCGTGTGCC TCTACACACC
CTTCGCGCCG AGATCGACTA CGCCACAAAA GTAGCTAGCA CTACCTACGG AGTACTAGGC
ATCAAGGTCT GGATCTTCAA AGGCGAAGTA CTGGGAGACG AGGCCCAGTC AATGCCTGTG
GGTGCAAGCC CACGGCGCAG GGGCAATCGT CGACCCCAAC AATTCGAAGA TCGCTCAAAC
GAGGGTTGA
|
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| Protein sequence | MGNKIHPTGL RLGITQEHRS RWYATSKMYP ILLQEDDRIR RFIHKKYGAA GISDVLIARK
ADQLEVELKT ARPGVLVGRQ GSGIEELRTG IQKTIGDHSR QVRINVVEVE RVDADAFLLA
EYIAQQLEKR VAFRRTIRMA VQRAQRAGVL GLKIQVGGRL NGAEIARNEW TREGRVPLHT
LRAEIDYATK VASTTYGVLG IKVWIFKGEV LGDEAQSMPV GASPRRRGNR RPQQFEDRSN
EG
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