Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_21721 |
Symbol | |
ID | 4776475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1927988 |
End bp | 1929487 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640087682 |
Product | LysM domain-containing protein |
Protein accession | YP_001018172 |
Protein GI | 124023865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0486774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGGCAC CTTATCTTTC ACCAAACTGT AGAGAGAGAT TGATGCGCCG GATCATTGTT AGCGCTCTAG CCCTGACAAC ACTTCTACCG CTGCCATCCT GGGGTGCCAG CGTCACAGTG AGGCCCGGTG ACACCCTTTC GGAGATCGCA ACGCGATATC AGGTATCCCT TCGGGCCTTG ATGCGGCTGA ACGGCCTAGC CAATGCCGAC AACCTCTTCA TCGGCCAGAC CCTCAAACTG CCAGGTAGCG CATCAGGCAC AGTCACTGCT GGTGCAAGCC GTCACACCGT ACGCAGTGGC GAGACCCTCA GCACCATTGC TGCCCGCTAC CGAGTGCGCC AGCAGGATCT CATCGCCCTC AATGGTCTGA GCAATGCCAA CAATTTATAT ATCGGCCAAA CGTTGAAATT GCCTGGAGCT GCTTCCGGGG CAATCAGAGC TGGAGCCAGT CGTCACACGG TACGCAGTGG CGAAACCCTC AGCATCATTG CTACCCGCTA CCGAGTTCGC CAACAGGATC TCGTCGCCCT CAATGGGCTT GCCAATGCCG ATACCTTATT CATCGGCCAG ACCCTCAAAC TGCCAGGCAG CTCATCAGGC ACAGTCAGAG CTGGCGCCAG TCGTCACACG GTACGCAGTG GCGAAACCCT CAGCACCATT GCTAGCCGCT ACCGAGTTCG CCAACAGGAT CTCATGGCCC TAAATGGCCT TGCCAATGCC AACCATGTCG AACGTGGCCA AACTCTGAAA CTGCCCCAGG GTGCGGTCGT TCCCAAACCC AAAGCAGCAG CAAAGAGCAA ACCTGTAGCC ATTAAGGCAA ATCCAAATGC CACCTCCCAC ACCGTGGCTC GAGGGCAAAC ATTGAGCCAA ATCGCTGGGG CTTATCAAAT CCCTGTAGCA ACCCTGATCA AGATCAATGG CATCAACAAT CCCAACAAGT TATTAGTCGG CAGCAAACTC GCACTACAGG TCAAACCATT AACAACAACC AAGCCAAAAT CCACCACGGC AGTTGCCATC AAACCGACTA CAACAACCAC CGTTAAACCA GCCGTTAAAC CAACTGTTAA ATCTACGATC AAGCCTGCTG CAAAACCACA AACCAAGCCC AAGTCCACCA CGGCAGTTGC CATCAAACCA ACTGCAAAAA CCACCGTTAA ACCAACCGTT AAACCAACTG TTAAGTCCAC GATCAAACCT GCTGCAAAAC CACAAACCAA GCCCAAATCC ACCCAGCAAG TTGCTGTCAA GCCTTCGCAA ACGCAATGGC GCACTTACGG GTCACTTCAA GTGGACTGGG CCAATTGGAA GTTCATGGGA GGAAGCTACG TGGCCCCAAC CCTCAACAAA GATGGCAAAG CCCTTTATCT GGCTGTGAAC TGCCCAGCGC GCAAGCTCAA TACCACCGGC ACGAATGGAT CTTGGAAAAC TTGGGGTGCT CCACAGCAGC GCTTTGAGCA TGATCTCGTC AAGGATCTCT GCAAAGCCAA AGGCGGCTAA
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Protein sequence | MEAPYLSPNC RERLMRRIIV SALALTTLLP LPSWGASVTV RPGDTLSEIA TRYQVSLRAL MRLNGLANAD NLFIGQTLKL PGSASGTVTA GASRHTVRSG ETLSTIAARY RVRQQDLIAL NGLSNANNLY IGQTLKLPGA ASGAIRAGAS RHTVRSGETL SIIATRYRVR QQDLVALNGL ANADTLFIGQ TLKLPGSSSG TVRAGASRHT VRSGETLSTI ASRYRVRQQD LMALNGLANA NHVERGQTLK LPQGAVVPKP KAAAKSKPVA IKANPNATSH TVARGQTLSQ IAGAYQIPVA TLIKINGINN PNKLLVGSKL ALQVKPLTTT KPKSTTAVAI KPTTTTTVKP AVKPTVKSTI KPAAKPQTKP KSTTAVAIKP TAKTTVKPTV KPTVKSTIKP AAKPQTKPKS TQQVAVKPSQ TQWRTYGSLQ VDWANWKFMG GSYVAPTLNK DGKALYLAVN CPARKLNTTG TNGSWKTWGA PQQRFEHDLV KDLCKAKGG
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