Gene P9303_19041 details

Gene Information

• Locus tag: P9303_19041
• Symbol: def
• ID: 4776010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 1664947
• End bp: 1665492
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640087413
• Product: peptide deformylase
• Protein accession: YP_001017911
• Protein GI: 124023604
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.175105
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTGTGA AGGAAATCCT GCGTATGGGC AACCCTCAAT TGAGGCAAGT GTCCAAGGTC 
GTCGATGATG TCTCTGCTGA GCTGATCATT TCACTCATCA AGGATTTACA AGACACGGTG 
AAGGCCCATC AAGGAGCAGG ACTCGCCGCA CCCCAAATTG GTATCCCTTT AAGAGTGGTG 
CTGTTTGGTG GAGGAGGCCC TAATCCCCGC TATCCCGAGG CCCCATCGAT TCCACAAACA 
CTTCTGATTA ATCCTGTCTT AACACCAATC GACTCTGATC TAGAGGATGG TTGGGAGGGG 
TGCTTGAGTG TGCCAGGCCT GCGGGGCAAG GTATCCCGCT GGAGTCGGAT TCACTACAGG 
GCGCTCAATG AAGATGGTTT AGAGATTGAG CATTGCCTTG AGGGATTCCC AGCAAGAGTG 
ATCCAACATG AATGTGACCA CTTAGACGGG GTTTTGTTTA CCGATCGTCT AGTTGACTCT 
GCCTCATTTG GATTCACAGG GGAGTTAGAA GCTGCTGGAG TGGTCCCTAT GAAAACAGAT 
AAGTAG 

 

Protein sequence

MAVKEILRMG NPQLRQVSKV VDDVSAELII SLIKDLQDTV KAHQGAGLAA PQIGIPLRVV 
LFGGGGPNPR YPEAPSIPQT LLINPVLTPI DSDLEDGWEG CLSVPGLRGK VSRWSRIHYR 
ALNEDGLEIE HCLEGFPARV IQHECDHLDG VLFTDRLVDS ASFGFTGELE AAGVVPMKTD 
K