| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_17521 |
|---|
| Symbol | |
|---|
| ID | 4778296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 1532370 |
|---|
| End bp | 1533371 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640087259 |
|---|
| Product | GIC family ligand gated channel |
|---|
| Protein accession | YP_001017759 |
|---|
| Protein GI | 124023452 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.689704 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA GGGTTGGAGT GAGTGGTTCG CCACCATTTG TGGACAAGAG GGCTGATGTA
TATGAGGGGA TTAGTATTGA AGTTTGGGAA CAAATCGCTA ATGCAGAGAA GCTTGAATAC
ATTCTCGTTC CATATCCCAA CATAGATTCG AACATCAAGG CGGTTGCTGA TGGAAAGATT
GATTTAGCCA TCGGGCCTAT CAGCATTACG CCAGATCGGG CGGCAAAAAA TGGGATTGAA
TTCACTCAAC CTTATTTCTA TGCAGAGGAG GGTGTTTTAG TACCATCACA GCCACCCGGA
TTGTGGACGA GGATCAAACC TCTCTTTGGT GTCGCTGCTT TATCTTCTAT CACGTTCTTG
CTATTTACAC TTTTTTGTGT AGGCAATCTG ATTTGGCTTG CAGAGCGAAA ACGCAACCCT
GAACATTTTC CTCCTCAATA TATAAAGGGT CTAGGGAATG GGATTTGGTT TGCCTTGGTT
ACACTCACCA CCGTAGGTTA CGGAGACCGT GCACCTTTAA CGAAAGCAGG AAGGACTATA
GCAGGGGTCT GGATGGTAAT TTCGCTAGTA TCAGTGTCGA CAATTACTGC AGGATTGGCT
TCGGCATTTA CCGTCTCGCT ATCTCAGACA CAATTGTCTA GGATCATGAA ACCATCGGAT
TTGGATGGTG AACTAATTGG CGTAGTCACT GGCACCACAG GTGTATCTTT AGCAAGATCA
TATGGCGCAC GGCCGTTGCC AGTACCAACC CTTAAGGAAG CTATTCATCT AATCAAGAAA
AATAAAGTCT CAGGACTGAT CTCAGACAAA CCTATCTTGA GTTATTATAT GAAAAATAAT
CCTGATAAAT CTCTAAAATT AGCACCTTTT AGGCTTTCCC TTCAGACCTA TGGATTTGTC
GTGCCTAGTG ATAGTCCATT GGAACGTTTA ATTAATATTG AACTCCTTCG TCTTGAACGC
AGTAATCAGG TTCAAGCGAT AAGCGACAGG CTTTTGAAAT AA
|
|---|
| Protein sequence | MALRVGVSGS PPFVDKRADV YEGISIEVWE QIANAEKLEY ILVPYPNIDS NIKAVADGKI
DLAIGPISIT PDRAAKNGIE FTQPYFYAEE GVLVPSQPPG LWTRIKPLFG VAALSSITFL
LFTLFCVGNL IWLAERKRNP EHFPPQYIKG LGNGIWFALV TLTTVGYGDR APLTKAGRTI
AGVWMVISLV SVSTITAGLA SAFTVSLSQT QLSRIMKPSD LDGELIGVVT GTTGVSLARS
YGARPLPVPT LKEAIHLIKK NKVSGLISDK PILSYYMKNN PDKSLKLAPF RLSLQTYGFV
VPSDSPLERL INIELLRLER SNQVQAISDR LLK
|
|---|
| |