Gene P9303_16001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_16001 
SymbolumuD 
ID4775932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1404473 
End bp1404949 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID640087109 
Productputative SOS mutagenesis protein UmuD 
Protein accessionYP_001017609 
Protein GI124023302 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.805764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCA GCGAGCCTCT TCTTCATTTG CGCTCCGAGC GGAAGCAGCA GATCCTGCCA 
TTAGCGAGTG AGCACGTGGC GGCAGGCTTC CCCTCCCCTG CTGAGGACTA TATCGAGATC
GGCATCGACC TCAACGAACA ATTGATTCGT CATCCAGCTA GCACCTTCTT CCTGCGTGTT
AGCGGTCACT CAATGACAGG TGTTGGCATC CACAATGGCG ACCTCTTAGT TGTCGACCGC
AGCCTAGATG CACGCCCCGG TCACATCGTG GTGGCGATTC TTGATGGTGC CTTCACTCTC
AAACAACTTG TCCGCCACCG TGGCGTACTG CGTCTAGAGG CCGCCCATTC CAATTACCCA
CCGCTGGATC TGGCTCGCTT CGGTGACGTG CAAATCTGGG GTGTGGCAGT GCATTCCATT
CATAGCCTCA ATCCTGCGCA GCAAACATCC CACTCAACAC AACGCCTAGA TGAATAG
 
Protein sequence
MEFSEPLLHL RSERKQQILP LASEHVAAGF PSPAEDYIEI GIDLNEQLIR HPASTFFLRV 
SGHSMTGVGI HNGDLLVVDR SLDARPGHIV VAILDGAFTL KQLVRHRGVL RLEAAHSNYP
PLDLARFGDV QIWGVAVHSI HSLNPAQQTS HSTQRLDE