Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_16001 |
Symbol | umuD |
ID | 4775932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 1404473 |
End bp | 1404949 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640087109 |
Product | putative SOS mutagenesis protein UmuD |
Protein accession | YP_001017609 |
Protein GI | 124023302 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.805764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTCA GCGAGCCTCT TCTTCATTTG CGCTCCGAGC GGAAGCAGCA GATCCTGCCA TTAGCGAGTG AGCACGTGGC GGCAGGCTTC CCCTCCCCTG CTGAGGACTA TATCGAGATC GGCATCGACC TCAACGAACA ATTGATTCGT CATCCAGCTA GCACCTTCTT CCTGCGTGTT AGCGGTCACT CAATGACAGG TGTTGGCATC CACAATGGCG ACCTCTTAGT TGTCGACCGC AGCCTAGATG CACGCCCCGG TCACATCGTG GTGGCGATTC TTGATGGTGC CTTCACTCTC AAACAACTTG TCCGCCACCG TGGCGTACTG CGTCTAGAGG CCGCCCATTC CAATTACCCA CCGCTGGATC TGGCTCGCTT CGGTGACGTG CAAATCTGGG GTGTGGCAGT GCATTCCATT CATAGCCTCA ATCCTGCGCA GCAAACATCC CACTCAACAC AACGCCTAGA TGAATAG
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Protein sequence | MEFSEPLLHL RSERKQQILP LASEHVAAGF PSPAEDYIEI GIDLNEQLIR HPASTFFLRV SGHSMTGVGI HNGDLLVVDR SLDARPGHIV VAILDGAFTL KQLVRHRGVL RLEAAHSNYP PLDLARFGDV QIWGVAVHSI HSLNPAQQTS HSTQRLDE
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