| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_14771 |
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| Symbol | |
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| ID | 4776294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1272073 |
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| End bp | 1274124 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640086987 |
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| Product | ribonuclease II |
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| Protein accession | YP_001017488 |
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| Protein GI | 124023181 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0883756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGCCTT CTCTACAGCA AGGTGATTTA GTTGGCTTTG TTTTAAAAGG TCAACCACAA
ATTGGCCTGC TAACTTCCTT GAAGGGCAGC CGAGCAATCG TAAGCGTTGC AGGAACACGG
CGAGAACAAC AGCTGGCCAG TCGAGAGCTG TCCGTTCTAA AGCAAAAACA CAACATGGTA
GAGGTGGAGA CATCTCTACC CACAATGAGT GAGGTCCGTA ACCTTAGTCT TAATTCACGC
GATTTAATTG CTGGTTGGCG ATTGCTCGAA GGCGAAAGGC GTAAAAGTAA GACTTCACCA
ACAGCACTCA AAATTACAGA ACTAGCTGAT TTACTCCTTA ATAAAGATGA TCCTATCCAT
CTCGCAGCAT TGTGGTTTTG GCTTAATAGC GACCAACCTT TATTTCGAGT TCGACGTGAC
CACCATGTTG AAGCACGTCA ACTTATTGAT CTGCGCCGCA TCCGCCAGCT GCGCCGCAAG
CAACAATCTC GAGTGCAGCA ACGCCTAGAT TCTCTTGCAT TGCTGATAGC AGATACACCT
CTGAGCAAAG ATCAGTGGCA GGATTTACCC TCGGATCTTC AGTTAACTAT CAACCGTTTA
ATCGAGTTGG CTGACGGTCC AGAGGATGCT TTTTTAACAG ATGAGCAAGC TCTTGAGCTG
ATTAAAGATT TAAAGTTGGG TCGATCGCTG AGCGACCTCC GTTATTGGTT GATCAAGAAA
GGCTGGCGCG ATCCACACGA TCTAACAACT CTCAAAGGCA GTATCTGGAC AAAAAGCTTT
GAAGGGAGTG TACAAGCTCA AGCGGACCAA TTACTCAATA AGTTTGAGCA ACTATCGTTC
GCAAGCGATG ATAGTCGTCT TGATTTGAGT GATTTAAGAA CCTACACCCT CGACGATCAT
CAAACTCAGG AAATTGATGA TGCAATCTCT TTGCAGTCTG TTGATCAAGA CAGCTGGGTT
TGGATCCATA TCGCCGATCC GGCAAGACTT ATTCCTGTTG ACAGCCCCTT AGATCTTGAG
GCTCGTGCAA GAGCAACCAG CCTCTACTTG GCTGATGGCC TAAGACCAAT GCTGCCATTG
AGTGTTGCCG CTGAAGTTCT CAGTCTTAGA GCTGGCCGTC GCTGTGCAGC GTTGAGTGTT
GCTGTGGTTC TAGATGAATC AGGATGTATA GCCGACACTC GTGTTTGTCG CACTTGGATT
CGCCCCTGCT ATCGACTCAC TTATGAGGAT GGGGATGAAT TGATTGAGCT TGCGCCTCCT
GGCGATGAAG ATCTTTCAAC ACTCGCAAGC CTGCTCAAAA AACGTCAATT ATGGCGTGAG
CGACAAGGTG CACTGCTGCT TGAACAATCT GAAGGGCGAT TCAAAGTCAA GGATGATCAG
CCTGAGCTTC ATGTTGTTGA GTCAACTCCA GCCAGACGGT TAGTAAGCGA AGCCATGATC
CTGATGGGTA CTGTTATTGC TGAATTTGGA AAGCGTCAAA ACCTTGCTCT GCCCTATCGC
AGCCAGCCTC CAACTCAACT ACCCAGTGCA ACTGACTTAT CACAGTTGAT TGAAGGACCT
GTCCGACATG CCGCGATCAA GCGTTGCCTT AGCCGAGGTG TCCTTGGTAC TCGTCCGATG
GCTCATTTCA GTCTTGGCCT CTCTGCCTAC GTACAAGCCA GTTCGCCGAT CCGTCGCTAT
GCAGATTTAC TTGCCCATCG ACAGGTGGTG GCTCACTTAG GAGGCTCAGT TCCATTAAGC
GAGCACGCTC TCATGGTGCA GTTGGATGCA CTTGAAGACC CTCTTCGCCA AGCACAGCAA
ATCCAACGCG AAGACCAGCG ACACTGGCAA AAGGTGTGGT TTTTAAAACA TCGCCATGAA
CAATGGCCAG CCCTATTTCT GCGCTGGTTG AGACCACAAG ATCAGATTGC ACTTGTGCAT
GTGGAATGCC TGGCTATGGA TCTTGCCTGC AAGCTAAACG GTTTGATCGA CCCTATTCCA
GGTCTTGCAT TGATCATGAC AGTTCTTGCA ATTGATCCAT TGACTGATCA AATTGAGTTG
GTCGCCAAGT AG
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| Protein sequence | MTPSLQQGDL VGFVLKGQPQ IGLLTSLKGS RAIVSVAGTR REQQLASREL SVLKQKHNMV
EVETSLPTMS EVRNLSLNSR DLIAGWRLLE GERRKSKTSP TALKITELAD LLLNKDDPIH
LAALWFWLNS DQPLFRVRRD HHVEARQLID LRRIRQLRRK QQSRVQQRLD SLALLIADTP
LSKDQWQDLP SDLQLTINRL IELADGPEDA FLTDEQALEL IKDLKLGRSL SDLRYWLIKK
GWRDPHDLTT LKGSIWTKSF EGSVQAQADQ LLNKFEQLSF ASDDSRLDLS DLRTYTLDDH
QTQEIDDAIS LQSVDQDSWV WIHIADPARL IPVDSPLDLE ARARATSLYL ADGLRPMLPL
SVAAEVLSLR AGRRCAALSV AVVLDESGCI ADTRVCRTWI RPCYRLTYED GDELIELAPP
GDEDLSTLAS LLKKRQLWRE RQGALLLEQS EGRFKVKDDQ PELHVVESTP ARRLVSEAMI
LMGTVIAEFG KRQNLALPYR SQPPTQLPSA TDLSQLIEGP VRHAAIKRCL SRGVLGTRPM
AHFSLGLSAY VQASSPIRRY ADLLAHRQVV AHLGGSVPLS EHALMVQLDA LEDPLRQAQQ
IQREDQRHWQ KVWFLKHRHE QWPALFLRWL RPQDQIALVH VECLAMDLAC KLNGLIDPIP
GLALIMTVLA IDPLTDQIEL VAK
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