| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_14671 |
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| Symbol | cspR |
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| ID | 4778809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1262797 |
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| End bp | 1263297 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640086977 |
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| Product | SpoU family tRNA/rRNA methyltransferase |
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| Protein accession | YP_001017478 |
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| Protein GI | 124023171 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.120716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATC CAAGTGAACT CTCACCATTA CGCGTAGCTT TATACGAGCC ACGGATTCCA
CCCAATACAG GAAATATCGC CAGGACCTGT GCGGCCTTCC GCATACCACT AGCTCTGATT
GAACCTCTTG GGTTCAGCCT TGATGATCGC TATCTACGTA GAGCAGGACT TGATTACTGG
CCTCACGTTG CTTTGTCAGT TCATTCTGAC CTGGATACAT TTCGCGAGTG CCTTCCATTA
AATCATCGAC TGATCGGTTG CAGCAGATTT GGAGGAATCC CCCTCCGTTC GATGCGTTTC
CAAACCGGAG ATGTTTTGCT TTTTGGCCGT GAGGACACCG GGCTTCCCAC CAAAATCCGT
CAGCAGTGTG ATCAGATCAC GACAATTCCC ATGCCTGGAG CAGCAAGTGA ACAGGGGCAG
GGCGGCGTAA GGAGCCTCAA CCTTTCTGTG GCTTGCGCCA TCGTGAGCTT TGAGGCTGGC
CAGCAACTGG GGCTGTGGTG A
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| Protein sequence | MSDPSELSPL RVALYEPRIP PNTGNIARTC AAFRIPLALI EPLGFSLDDR YLRRAGLDYW
PHVALSVHSD LDTFRECLPL NHRLIGCSRF GGIPLRSMRF QTGDVLLFGR EDTGLPTKIR
QQCDQITTIP MPGAASEQGQ GGVRSLNLSV ACAIVSFEAG QQLGLW
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