Gene P9303_13451 details

Gene Information

• Locus tag: P9303_13451
• ID: 4777998
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 1151002
• End bp: 1152972
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640086853
• Product: putative mechanosensitive ion channel, MscS family protein
• Protein accession: YP_001017357
• Protein GI: 124023050
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0668] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGCTAC TTTCCAAAAA AAAATTAGGT TTGCGTCGGT TGGTATGTCT TTTTTGTGGC 
TTACTGATCA GTCTGCTTTT TTCCCCTGCT TTTGCACAGA TCTCGTTGGG GTCAACAGCA 
GCTCCCATCA GTAATCCTAT GAACCGACCT GTCTGGGACC TTAATAGACC TTGGCGTTGT 
GGCCGCCTTT ACTGCAGCAG AGTTGTTTTT CCTGTTCGAA TTCTTAGCCA GAACAATCGT 
CTCACTCTCG CTGCGCAAGC TACAAATAAA ATTACTCCAC AGCAGGCAGC CCAGAACATT 
GAACAACGAG CTCAATCTGT ACAGTTAACT GTTAAATCTG TCAAAAATCG TCTTGTTAGG 
TTCTGGCGAG AGACCCAGTT GTCTGGGAAT GCTTCTACTT ACGATCTACA ACGAATCTAT 
GATCCACGCT TCTGGTGGTT CTTACATCAG AAACCTTTGC ATCCTCTTAC TCCAGCAGTG 
GAGATCGGCA CACAAAATAA AGCCACAGTT ATCTATTTGC CAGACAATCC AAAGTATCGT 
CTTTTTAAAC AGACAGTAAT TACAGTAACG GCTCCAGATG CTCAGCATGC AGGCATTGAG 
ATCCCTCAGT TGGCGCAAGA GTGGCAGCAG AGAATAAGGG TCAACTTTAG TGATCGTTTG 
TGGGGCCTGG AATTTTCCTC CTCCTTTCCT GGATTACGTG TTTTACTTTC TGTCGGCTTG 
TTGTTAACAG GCATTTTTGG CTTGTTTCTT CTCAAAACCA TACGAGCTTC ATTGCTCTCC 
ATAAATCGTC GTTTATTGCA TAAACAGGAA TCACTTGCAG AATCTGTTAA AGACGATGTG 
ATGGCTGCTT ATTCGGGCAA CCTTATGCCC CTTTCCAATA ATGACGGACA TGTTAATTAT 
ATCGATTCAC TCGAGCATTC AAAGGATTCA TCTGGCGTCG ATAATGTCAA TGAGTCTACA 
ACTCAAGACC CTAATCCAGG CATCAATAAT CTTCCTAGAT CAGCTACTTA TACTAATGCT 
TTATTGAACC AGACCCAGAA TTTCCTAGAA CTCGTTTTAT TAGTAAGTAA TTTTCTGCAA 
ATCGCATTTT TAGTCTTAGT CTTGCTTTCT GCTACAGCTG TTTATCCTTC AATGCGTATA 
TACGCATTTA TTGCCCTACA GCAGTCGATT GCGATTCCTT TGATTTGGGT AGGCGTCTTT 
ATTTTGCGGC TTTTGGTTGT CATCATGATT GATTTCAATA TCAATAATTG GATAAGGCGG 
ATTAGTAGCA CAGATGCTAG TTCGATGCGC TACACGCTTA GGGCAAGTAC ATACTCTAAG 
GTTCTTAAAG GTGGAGCAAC CGTAATTACA ATCTTTCTAG GTCTCGTTTT TACTTTAACA 
ACAATAGGAG TCGACCGGTC TATTTTTACC AGTGCTGGAG TAATCGCTGT GGGTGTGGGT 
TTCCTTTCTC GAAATGTACT TGAGGATATT CTTAACGGAT TTCTTATCTT GGCTGGTGAT 
CGTTTTGCAA TAGGTGATGT CGTGACGATC GGCAGCTTTG GTGGCTTTGT TGAAGATATG 
AATTTATTCA ACACTCAACT TCGTGGTTCT GATGGTCAAC TAACAACTCT GCCTAATAGC 
CAGATTCGAA CCGTAGAGAA CCTTACTAAG GATTGGTCTC GAGTTAATTT TGATATCGAG 
GTATCAGCTC GCGAGAATCT TCGCCATGTG CTCGATGTGG TTCGGCTTGT AGCCAATAAC 
ATGAGAGATG ACAAGCAATG GAGTGATTAT TTTCTTGATG CTCCCGAGAT CCTTGGTATT 
GATCATGTGC AATCATCAGG TTGTTTAATC CGTGTTTGGA TAAAAACTCA ACCCTTGGCT 
CAGTGGAGTG TAGGCCGTGA GTTTAGGTTG CAGATTAAAG AAGCTTTTGA CCGGGAGGGA 
ATTACACTTG GTGCTCCTAT TCAAAATGTG TTATTTTTCC GACCAAAATG A 

 

Protein sequence

MQLLSKKKLG LRRLVCLFCG LLISLLFSPA FAQISLGSTA APISNPMNRP VWDLNRPWRC 
GRLYCSRVVF PVRILSQNNR LTLAAQATNK ITPQQAAQNI EQRAQSVQLT VKSVKNRLVR 
FWRETQLSGN ASTYDLQRIY DPRFWWFLHQ KPLHPLTPAV EIGTQNKATV IYLPDNPKYR 
LFKQTVITVT APDAQHAGIE IPQLAQEWQQ RIRVNFSDRL WGLEFSSSFP GLRVLLSVGL 
LLTGIFGLFL LKTIRASLLS INRRLLHKQE SLAESVKDDV MAAYSGNLMP LSNNDGHVNY 
IDSLEHSKDS SGVDNVNEST TQDPNPGINN LPRSATYTNA LLNQTQNFLE LVLLVSNFLQ 
IAFLVLVLLS ATAVYPSMRI YAFIALQQSI AIPLIWVGVF ILRLLVVIMI DFNINNWIRR 
ISSTDASSMR YTLRASTYSK VLKGGATVIT IFLGLVFTLT TIGVDRSIFT SAGVIAVGVG 
FLSRNVLEDI LNGFLILAGD RFAIGDVVTI GSFGGFVEDM NLFNTQLRGS DGQLTTLPNS 
QIRTVENLTK DWSRVNFDIE VSARENLRHV LDVVRLVANN MRDDKQWSDY FLDAPEILGI 
DHVQSSGCLI RVWIKTQPLA QWSVGREFRL QIKEAFDREG ITLGAPIQNV LFFRPK