Gene P9303_08571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_08571 
Symbol 
ID4776748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp775214 
End bp776530 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content57% 
IMG OID640086366 
Producthelicase domain-containing protein 
Protein accessionYP_001016873 
Protein GI124022566 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGTGC ATGCTGGCCC AGGTGCAGGC AAAACCCTCG GCGCCCTCCT CAGCTTCGAG 
GCCATGCAGC GAGGGGGGGG CTTAACGCGA TTCATAGTTT TTTGCCACCG CAACTCGATC
CTGAATCAAT GGCACCAAGC ATCTAAACAA CTAGGACTCA ACTTGCAGGA CTGGGAAGCT
TGCCCAGAAC AACCCGAGAT CCTCAAACAA GCAGACGGCT GGGCAGTGAC CTATCAAGGT
GCCGGTCTTC AGTTAGAGAC CCTGATAGCA GAACTAAAAG ACTGGGCCGG TGACGGCTTA
CTCGCTATTG CCGATGAAGC CCACCACCTC GGGATGAATC CAGATGAACC TCAGGGCCCA
GCCTGGGGAC GAACCTTTCT TGCTCTCACT GGCAGCAGCA AAATACGGCT TGGTCTTACT
GGCACGCCCT TCCGCGCCGA CAATCTGGCC TTCTGTGCAG CCCGACGGGT GCGCGTGGAA
GCCGAGGGAG CTCTGGTGGA GCAGATCAGC CCAGATCTCT GCGTGGAACC TAGTGAGCTG
ATTCATTCTG GAGATGTGCG CCCACTCGAA TTCCGCTTCC AGGACGGCTG GGTGGAACAC
AGCCGTCCTG GACAGCCCGA TCGAGATGTC TCCCCCCTCT CTGCTGAAGT GCGTGAAAGC
TGGCGAGCAC GCAATCTGCG TAGGGCTATT CGGATCTCAG ACTCAAGCAG TATTGCCTTG
CAACTGTTAC TACGGGCACG ACGTCAACTT GAGAAGGTAC GTCGCCACCA TCACGATGCA
GCAGGCCTTG TGATCGCTAG AGATATCGAA CACGCTGTTG GCATCGCCCA GCTCCTGCAA
GAGGAAGGCG ATCGTGTCGA GCTGGTGCAC TCCCAAGACC GTGATGCCAG TGCTCGCCTG
GCAGCCTTCC AAACAAGCAA AGCCGACTGG TTAGTAAGCA TCGACATGTG TGCCGAGGGA
TTCGATGCCC CAAGACTTCG CGTGGTTGCT TATCTCACAA CGGTGGTAAC GCGCAGCCGA
TTCATACAGG GAATCACTCG CGCTGTAAGG ATCTCCACAG CAAGAGCATC GTTAGAGCCG
GTACCTCGTC ACCCTTCCTA TGTCTTTGCA CCTGCAGATC CCTTACTGAT GGGCCATGCC
CGAAGCTGGT CGAGGACAGA GCCATATCTC ATCAGAGACA GCGAAGCGAA AGCAGAGGGA
AACACAACGA TGGGTCACTG GCGAGGCCCA AGCCTGCCAC TCGAAGCAGT CAACGATGGA
GCAGGTGCTG TCATCCGACT ACGCACACCA AATCTGCCCA GTTTTTTGCA GCGTTGA
 
Protein sequence
MLVHAGPGAG KTLGALLSFE AMQRGGGLTR FIVFCHRNSI LNQWHQASKQ LGLNLQDWEA 
CPEQPEILKQ ADGWAVTYQG AGLQLETLIA ELKDWAGDGL LAIADEAHHL GMNPDEPQGP
AWGRTFLALT GSSKIRLGLT GTPFRADNLA FCAARRVRVE AEGALVEQIS PDLCVEPSEL
IHSGDVRPLE FRFQDGWVEH SRPGQPDRDV SPLSAEVRES WRARNLRRAI RISDSSSIAL
QLLLRARRQL EKVRRHHHDA AGLVIARDIE HAVGIAQLLQ EEGDRVELVH SQDRDASARL
AAFQTSKADW LVSIDMCAEG FDAPRLRVVA YLTTVVTRSR FIQGITRAVR ISTARASLEP
VPRHPSYVFA PADPLLMGHA RSWSRTEPYL IRDSEAKAEG NTTMGHWRGP SLPLEAVNDG
AGAVIRLRTP NLPSFLQR