Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_06061 |
Symbol | serS |
ID | 4777123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 572208 |
End bp | 573485 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640086113 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001016623 |
Protein GI | 124022316 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.152224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTTGACC AGCGCCTGGT GCGGGACAAC CCCGACCTGA TTGCCAACGA ACTGGGCCGA AGGGGCATGA CGTTAGATCT AACGGGCCTA CAACTGATCG CCCAGCAGCA AAGAAATCTC GAGGAACAGC GCAGCAGCCT CCAGGCAGAA GGAAATCGGA TCGGCAAGGA AGTCGGTCAA CGTATCCAGC AGGGAAGCGA CCCAAAAGCC AGCGACGTGG CAGAACTACG ACATCAAGGC AACCTAATCA AGCAAAAGGT GGCCGTTTTA GAAGACGAGG AGAAACAACT ATCAGCCCGA TTGCGAGAGC AACTGCTGAG CTTGCCAAAC CTGCCCTCCC CTGATTGTCC TGAAGGACGC GACGAGAACG ACAACCAGGA AAGACACTGT TGGGGCAAGC CACGTGAAGG GAAAGACCTT CTGGAGCACT GGTCAATTGC CGAGCGGCTC AACCTTTTCG AAACAGAACG CTCTGTACGG ATTGCCCAAA GTCGCTTCGT CACCCTGATG GGTCAGGGTG CGCGACTGGA ACGAGCACTC ATCAACTTCA TGCTCGACCT CCACACCTCA AAGGGATATC GAGAAGTGAT GCCTCCCGTA CTGGTGAATA CCGCCAGCCT TACGGGCTCT GGCCAGCTAC CAAAATTCGC CGAAGAAAGC TTCCGCTGCG CTGAAGACGA CCTCTGGCTA ACACCAACTG CAGAGGTGCC GGTGACATCT CTGCACCGCG ATGAAATCAT CCCCGCTGAC CAACTGCCAC TGCGATACGC CGCTTACAGT CCATGCTTTC GCCGCGAAGC TGGCAGCTAT GGACGAGACA CCCGTGGCCT GATCCGGCTG CATCAATTCA ACAAGGTGGA GCTCTATTGG TTCGTCCATC CAGACCATTC GCAGGCTGCC CACGCTCAGA TCACAGCCGA TGCCGAAGCC GTGCTGCAGG CCTTGGAATT GCCCTACCGC GTCATTGAAC TTTGCACAGG TGATCTAGGG TTTTCTTCCT CACGCACCTA CGACCTCGAA GTCTGGCTAC CAGGAGCAGG CGCCTTCAGA GAAATTTCAA GTTGCAGTAT CTGTGGAGAC TTCCAAGCAC GGCGATCTGC TATTCGCACC AAAGACCAAA AAGGTACCCG ACTCATCCAC ACCCTCAATG GCAGTGGCCT GGCGGTAGGA CGCACCATGG CTGCCCTTCT CGAAACAGGC CAACAATCTG ATGGGAGTGT CCTCCTCCCC AAGGCACTTG TGCCTTATTT CGGCAAAGAT CGACTAGAGC CAGAATGA
|
Protein sequence | MLDQRLVRDN PDLIANELGR RGMTLDLTGL QLIAQQQRNL EEQRSSLQAE GNRIGKEVGQ RIQQGSDPKA SDVAELRHQG NLIKQKVAVL EDEEKQLSAR LREQLLSLPN LPSPDCPEGR DENDNQERHC WGKPREGKDL LEHWSIAERL NLFETERSVR IAQSRFVTLM GQGARLERAL INFMLDLHTS KGYREVMPPV LVNTASLTGS GQLPKFAEES FRCAEDDLWL TPTAEVPVTS LHRDEIIPAD QLPLRYAAYS PCFRREAGSY GRDTRGLIRL HQFNKVELYW FVHPDHSQAA HAQITADAEA VLQALELPYR VIELCTGDLG FSSSRTYDLE VWLPGAGAFR EISSCSICGD FQARRSAIRT KDQKGTRLIH TLNGSGLAVG RTMAALLETG QQSDGSVLLP KALVPYFGKD RLEPE
|
| |