| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_05531 |
|---|
| Symbol | lpxB |
|---|
| ID | 4778596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 536087 |
|---|
| End bp | 537265 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640086058 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001016570 |
|---|
| Protein GI | 124022263 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGCC TGCTGATCAG CACTGGCGAG GTCTCTGGTG ATTTGCAGGG AAGTCTCTTG
ATTCAAGCTC TTCAAAGGGA GGTTGAACGG CGTTCCTTAC CGCTTGAGTT GATGGCCCTT
GGAGGTCCCC GCATGCAGGC TTCTGGTGCA GAACTGCTTG CTGATACGGC TCCGATGGGT
GCGATTGGAC TTTGGGAGGC CCTGCCTCTG GTGCTCCCCA CTTTGCGACT TCAGTCTCGG
GTGGATCACG TGCTCAAGCA GCGACCACCC GATGCCGTGG TGCTGATCGA TTACATGGGG
GCCAACGTGC GTTTGGGGCA CAAGTTGCGG CGCTGGTTTC CCAGGGTGCC GATCATTTAC
TACATCGCTC CTCAGGAATG GGCTTGGCGT TTTGGCGATG GCGGCACCAC TCAGCTGCTG
AGTTTCACCG ACAGAATTTT GGCGATCTTT CCCGTTGAAG CTGAGTTCTA TGCCCAGCGG
GGGGCCAAGG TGACGTGGGT CGGTCATCCA TTACTCGATA CGGTGAGTGT GCTGCCTGAT
CGTCAGCTGG CGCGTGAGCG GCTTGGCTTG AAGTCTGGCC AAAGATTGTT GTTGCTTTTA
CCGGCTTCCC GGCAACAGGA ACTTCGTTAC TTGATGCCCA CTCTCGCCAA GGCAGCAGCT
TTGCTTCAGC AGCGTGACCC ATCCCTTGAG GTGATTGTTC CTGCCGGATT AGCAAGTTTT
GAGACGTCTT TGCAGAAGGC TCTTGAGGCC GCGGCAGTTC GAGGGCGAGT CCTTTCGGCT
CAGCAGGCCG ATGAACTCAA ACCAATGCTT TATGCGGCGG CTGATCTTGC CCTCGGCAAA
TCAGGCACCG TCAATATGGA GCTGGCCTTG CGTGGCGTTC CCCAGGTGGT GGGCTACAAG
GTGAGTCGGA TCACAGCATT TGTGGCTCGA CACTTTTTGC GCTTTCGGGT GGACCATATC
TCGCCGGTGA ATCTGTTGCT GAAGGAACGG CTTGTGCCGG AATTACTACA GGATGAGTTC
ACTGCAGAAG CACTTGTGCA GGCCGCTATC CCTTTATTGG AGGATCCTGC CCAGCGTCAT
GAGATGCTCG AGGGCTATTG GCGATTGCGG CAGACGCTTG GCGTTCCAGG TGTTACCGAT
AGGGCAGCCA AGGAAATCCT TGATTTAACC AAGCCATGA
|
|---|
| Protein sequence | MVRLLISTGE VSGDLQGSLL IQALQREVER RSLPLELMAL GGPRMQASGA ELLADTAPMG
AIGLWEALPL VLPTLRLQSR VDHVLKQRPP DAVVLIDYMG ANVRLGHKLR RWFPRVPIIY
YIAPQEWAWR FGDGGTTQLL SFTDRILAIF PVEAEFYAQR GAKVTWVGHP LLDTVSVLPD
RQLARERLGL KSGQRLLLLL PASRQQELRY LMPTLAKAAA LLQQRDPSLE VIVPAGLASF
ETSLQKALEA AAVRGRVLSA QQADELKPML YAAADLALGK SGTVNMELAL RGVPQVVGYK
VSRITAFVAR HFLRFRVDHI SPVNLLLKER LVPELLQDEF TAEALVQAAI PLLEDPAQRH
EMLEGYWRLR QTLGVPGVTD RAAKEILDLT KP
|
|---|
| |